BLASTX nr result

ID: Atractylodes21_contig00027011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027011
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632479.1| PREDICTED: putative uncharacterized protein ...   149   8e-34
emb|CBI33150.3| unnamed protein product [Vitis vinifera]              149   8e-34
ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA h...   117   4e-24
ref|XP_003552808.1| PREDICTED: putative uncharacterized protein ...   109   7e-22
ref|XP_004137287.1| PREDICTED: putative uncharacterized protein ...   104   2e-20

>ref|XP_003632479.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic-like [Vitis vinifera]
          Length = 1686

 Score =  149 bits (376), Expect = 8e-34
 Identities = 76/176 (43%), Positives = 108/176 (61%)
 Frame = -2

Query: 566 PNFIIELRAQTSDYNSYNRHEIVTLMGKFQCHPDDFTIYENGVVAARFFFQQWPNTLETV 387
           PNFIIELR        + + ++  L+   +  P+  T+  +G +AA  FF+QW +TLET+
Sbjct: 63  PNFIIELRP---GLGGFKKIDVDELLATCKLMPEKVTVLSSGPIAATLFFRQWVDTLETM 119

Query: 386 VYLWEAVLNGALSFMPRLVQNLIVPSDTEELNSRLRVLFSERIRGFMEGEMVKKWEKKLE 207
           VYLWE  L G   F P+L++N+I+PSD +EL SRL+  F   IR  +EGE VKKW+ +L+
Sbjct: 120 VYLWELRLEGKHLFTPKLIRNIIMPSDEDELRSRLQTTFGNHIRAILEGEEVKKWQNELQ 179

Query: 206 TVSNEIAKIDLSLRKPMRLVMHNELFKKKEGKAXXXXXXXXXXXEFKSGMECILNY 39
            +S+EIAK+   LRKP ++  H +L  +K+G             EFKS M CILNY
Sbjct: 180 HLSDEIAKVQGLLRKPNKIAAHEKLTSEKKGLLCDRDLISKRLKEFKSSMSCILNY 235


>emb|CBI33150.3| unnamed protein product [Vitis vinifera]
          Length = 1988

 Score =  149 bits (376), Expect = 8e-34
 Identities = 76/176 (43%), Positives = 108/176 (61%)
 Frame = -2

Query: 566 PNFIIELRAQTSDYNSYNRHEIVTLMGKFQCHPDDFTIYENGVVAARFFFQQWPNTLETV 387
           PNFIIELR        + + ++  L+   +  P+  T+  +G +AA  FF+QW +TLET+
Sbjct: 63  PNFIIELRP---GLGGFKKIDVDELLATCKLMPEKVTVLSSGPIAATLFFRQWVDTLETM 119

Query: 386 VYLWEAVLNGALSFMPRLVQNLIVPSDTEELNSRLRVLFSERIRGFMEGEMVKKWEKKLE 207
           VYLWE  L G   F P+L++N+I+PSD +EL SRL+  F   IR  +EGE VKKW+ +L+
Sbjct: 120 VYLWELRLEGKHLFTPKLIRNIIMPSDEDELRSRLQTTFGNHIRAILEGEEVKKWQNELQ 179

Query: 206 TVSNEIAKIDLSLRKPMRLVMHNELFKKKEGKAXXXXXXXXXXXEFKSGMECILNY 39
            +S+EIAK+   LRKP ++  H +L  +K+G             EFKS M CILNY
Sbjct: 180 HLSDEIAKVQGLLRKPNKIAAHEKLTSEKKGLLCDRDLISKRLKEFKSSMSCILNY 235


>ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein
           [Medicago truncatula] gi|355490965|gb|AES72168.1|
           Pre-mRNA splicing factor ATP-dependent RNA helicase-like
           protein [Medicago truncatula]
          Length = 1718

 Score =  117 bits (292), Expect = 4e-24
 Identities = 65/189 (34%), Positives = 105/189 (55%)
 Frame = -2

Query: 605 PPGSPPSCTTNRSPNFIIELRAQTSDYNSYNRHEIVTLMGKFQCHPDDFTIYENGVVAAR 426
           P  +PP    +R PNFI++L        + NR ++ +L+GK + +PD++  Y    VAA 
Sbjct: 42  PERNPP----HRPPNFILKLHLGR---RALNRDDVDSLIGKCKPNPDNYCFYPCDGVAAS 94

Query: 425 FFFQQWPNTLETVVYLWEAVLNGALSFMPRLVQNLIVPSDTEELNSRLRVLFSERIRGFM 246
             F QW +  + VV+ WE+ ++G   F P L+ N++VPSDT EL   LR +F+  ++  M
Sbjct: 95  LNFLQWTDARDAVVWFWESRISGGHDFTPELISNVMVPSDTVELEGSLRRVFASHVKELM 154

Query: 245 EGEMVKKWEKKLETVSNEIAKIDLSLRKPMRLVMHNELFKKKEGKAXXXXXXXXXXXEFK 66
           EG+ VKKW ++ + VS EI+++   L KP  + +  +  + K+G             EF+
Sbjct: 155 EGKEVKKWVEEWDRVSKEISRVVSLLGKPFPIRVQEQNIQMKKGLDEEKSLIERRLKEFE 214

Query: 65  SGMECILNY 39
             MECIL +
Sbjct: 215 FAMECILQH 223


>ref|XP_003552808.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic-like [Glycine max]
          Length = 1729

 Score =  109 bits (273), Expect = 7e-22
 Identities = 62/176 (35%), Positives = 97/176 (55%)
 Frame = -2

Query: 566 PNFIIELRAQTSDYNSYNRHEIVTLMGKFQCHPDDFTIYENGVVAARFFFQQWPNTLETV 387
           P F +ELR  +S  +   R ++  L+ +     D FT Y    VAA   ++ W    + V
Sbjct: 58  PYFRVELRLGSSPLH---RDDVEALIDECHSRHDTFTFYPVDDVAAVLSYRSWEQARDAV 114

Query: 386 VYLWEAVLNGALSFMPRLVQNLIVPSDTEELNSRLRVLFSERIRGFMEGEMVKKWEKKLE 207
           V+ WEA L     F P L  N++V  D  +++ RLR +F+  ++G  EG+ VK+W ++ E
Sbjct: 115 VWFWEARLAEKHDFTPTLDSNVVVVKD--DVDCRLRPVFARHVKGLTEGKEVKRWMEESE 172

Query: 206 TVSNEIAKIDLSLRKPMRLVMHNELFKKKEGKAXXXXXXXXXXXEFKSGMECILNY 39
            +S EI+++  SL KP+RL +HNEL +KK+G             EF+S M+C+L Y
Sbjct: 173 RLSKEISRLSSSLSKPLRLGVHNELVEKKKGLVDEKNLVERRLKEFESAMQCLLKY 228


>ref|XP_004137287.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic-like [Cucumis sativus]
          Length = 1735

 Score =  104 bits (260), Expect = 2e-20
 Identities = 62/175 (35%), Positives = 99/175 (56%)
 Frame = -2

Query: 563 NFIIELRAQTSDYNSYNRHEIVTLMGKFQCHPDDFTIYENGVVAARFFFQQWPNTLETVV 384
           NF I+L     ++ + ++  +  L+ K    PD++ I + G VAA  FF+QW + LE +V
Sbjct: 52  NFAIDL---VLEHRTLSKCSVELLIAKCISKPDNYIIPQVGSVAAFLFFKQWVSALEYMV 108

Query: 383 YLWEAVLNGALSFMPRLVQNLIVPSDTEELNSRLRVLFSERIRGFMEGEMVKKWEKKLET 204
            LWE  L G   F P L   + +PSD +EL+ RL+ LF+ERI+  M+G+ V+ W+ K + 
Sbjct: 109 ALWELRLTGFHDFTPILKPRINLPSDVDELHERLQNLFAERIKLLMDGDKVRHWQNKYDL 168

Query: 203 VSNEIAKIDLSLRKPMRLVMHNELFKKKEGKAXXXXXXXXXXXEFKSGMECILNY 39
           V  +I +I  +LR+P+R+    +L +KK+G             EF S M  IL++
Sbjct: 169 VMVQINRISDTLRRPLRIDAAFKLNEKKKGLLVEKESIVRKMEEFNSAMRYILDH 223


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