BLASTX nr result

ID: Atractylodes21_contig00026988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026988
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                76   3e-12
gb|AAT38756.2| Putative methyltransferase family protein [Solanu...    73   3e-11
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    70   1e-10
ref|ZP_11076087.1| hypothetical protein B857_03969 [Bacillus isr...    62   6e-08
gb|ABB00038.1| reverse transcriptase family member [Glycine max]       60   2e-07

>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
 Frame = +3

Query: 3   MLRWSCG*TLMDRIPNEVFREELQVASIIDKLREGRLRWFGHILRESR*RP-------Q* 161
           MLRW CG T  D+I NEV RE++ VAS++DKLRE RLRWFGH+ R S   P         
Sbjct: 586 MLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRRCEVMVV 645

Query: 162 EGWRA*XXXXXXXXXXXXXWDEQLRGDMELLDLSEGMT 275
           EG R               W+E +R D+ +L ++E MT
Sbjct: 646 EGTR------RGRGRPKKYWEEVIRQDLAMLHITEDMT 677


>gb|AAT38756.2| Putative methyltransferase family protein [Solanum demissum]
          Length = 828

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
 Frame = +3

Query: 3   MLRWSCG*TLMDRIPNEVFREELQVASIIDKLREGRLRWFGHILRESR*RP-------Q* 161
           MLRW CG T  D+I NEV RE++ VAS++DKLRE RLRWFGH+ R S             
Sbjct: 3   MLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAAVRRCEVMVV 62

Query: 162 EGWRA*XXXXXXXXXXXXXWDEQLRGDMELLDLSEGMT 275
           EG R               W+E +R D+ +L ++E MT
Sbjct: 63  EGTR------RGRGRPKKYWEEVIRQDLAMLHITEDMT 94


>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = +3

Query: 3   MLRWSCG*TLMDRIPNEVFREELQVASIIDKLREGRLRWFGHILRESR*RP 155
           MLRW CG T  D+I NEV RE++ VAS++DKLRE RLRWFGH+ R S   P
Sbjct: 118 MLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAP 168


>ref|ZP_11076087.1| hypothetical protein B857_03969 [Bacillus isronensis B3W22]
           gi|405383715|gb|EKB43273.1| hypothetical protein
           B857_03969 [Bacillus isronensis B3W22]
          Length = 109

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/99 (40%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
 Frame = +3

Query: 3   MLRWSCG*TLMDRIPNEVFREELQVASIIDKLREGRLRWFGHILRESR*RP--------Q 158
           MLRW CG T  D+I NE  R ++ VA I  K+RE RLRWFGH+ R     P        +
Sbjct: 1   MLRWMCGHTRKDKIRNEDIRGKVGVAEIEGKMRENRLRWFGHVQRMPTDAPIRRCDYGTE 60

Query: 159 *EGWRA*XXXXXXXXXXXXXWDEQLRGDMELLDLSEGMT 275
            +G R                +E LR D+E LDL+E MT
Sbjct: 61  VQGRRG-------RGRPRKTLEETLRKDLEYLDLTEDMT 92


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/45 (57%), Positives = 32/45 (71%)
 Frame = +3

Query: 3   MLRWSCG*TLMDRIPNEVFREELQVASIIDKLREGRLRWFGHILR 137
           MLRW CG T  D+I NE  RE + VA I++K+ E RLRWFGH+ R
Sbjct: 270 MLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRLRWFGHVER 314