BLASTX nr result

ID: Atractylodes21_contig00026883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026883
         (1241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522602.1| ring finger protein, putative [Ricinus commu...   187   4e-45
ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vit...   186   1e-44
emb|CBI34030.3| unnamed protein product [Vitis vinifera]              185   2e-44
ref|XP_002323964.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-42
ref|XP_002310500.1| predicted protein [Populus trichocarpa] gi|2...   173   7e-41

>ref|XP_002522602.1| ring finger protein, putative [Ricinus communis]
            gi|223538078|gb|EEF39689.1| ring finger protein, putative
            [Ricinus communis]
          Length = 378

 Score =  187 bits (476), Expect = 4e-45
 Identities = 102/209 (48%), Positives = 135/209 (64%), Gaps = 11/209 (5%)
 Frame = -3

Query: 1146 NQETHDEFLDHD---VLDHPIWYIRTIGLQPSVISAITVVKYSKSDGLIEGTDCSVCLSD 976
            N+ TH+EFLD D   +LDHP+WYI TIGLQPSVI++I+V KY + DGL+EGTDCSVCL++
Sbjct: 103  NETTHEEFLDEDHGPILDHPVWYINTIGLQPSVINSISVCKYKRGDGLVEGTDCSVCLNE 162

Query: 975  FQEDETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRAGIVKNT--PTSDQNLDDS-GAME 805
            F+EDETLRLLPKC+HAFHI CIDTWLRSHTNCPLCRA IV N+   TS +   +S  + E
Sbjct: 163  FEEDETLRLLPKCSHAFHIPCIDTWLRSHTNCPLCRAPIVANSARATSSEGTSESLSSGE 222

Query: 804  ETQVAISIPXXXXXXXXXXXXDYQSSELRIGV-----VDEEDLNKXXXXXXXXXXDFLIM 640
            ET++ +S              +    ELR+G+     V++E+  K              +
Sbjct: 223  ETRIGVS----ENDQESERELEGGDGELRVGIEEEREVEDENTRKRSEFLNGEEEGIQPI 278

Query: 639  RRSVSLNDYAACRIRSDVHNNNYYHSDRH 553
            RRSVSL+  +A +I   + +     SDR+
Sbjct: 279  RRSVSLDSLSAFKISQALVSVCPVESDRN 307


>ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera]
          Length = 379

 Score =  186 bits (471), Expect = 1e-44
 Identities = 97/191 (50%), Positives = 127/191 (66%), Gaps = 12/191 (6%)
 Frame = -3

Query: 1134 HDEFLDHD---VLDHPIWYIRTIGLQPSVISAITVVKYSKSDGLIEGTDCSVCLSDFQED 964
            HD+F+D D   V+DHPIWYIRT+GLQPSVISAIT+ KY + DGL+EGT+CSVCL++F+ED
Sbjct: 108  HDDFIDEDQEPVVDHPIWYIRTVGLQPSVISAITICKYKRGDGLVEGTECSVCLAEFEED 167

Query: 963  ETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRAGIVKNT---PTSDQNLDDSGAMEETQV 793
            E +RLLPKCNHAFHI CIDTWL SHTNCP+CRAGIV +T   P+ +Q++++SG +EE +V
Sbjct: 168  EAVRLLPKCNHAFHIPCIDTWLSSHTNCPMCRAGIVSSTAGAPSPEQSVENSGPLEEARV 227

Query: 792  AISIPXXXXXXXXXXXXDYQSSELRIGVVDEEDL------NKXXXXXXXXXXDFLIMRRS 631
             I               + +  ELRIG  +E +L                  +   MRRS
Sbjct: 228  EI-----PENGGQFEEIEDEVCELRIGREEEGELGGVENERSSCEVAKEEVDEIQPMRRS 282

Query: 630  VSLNDYAACRI 598
            VS++  +A  I
Sbjct: 283  VSMDSLSASMI 293


>emb|CBI34030.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  185 bits (470), Expect = 2e-44
 Identities = 82/123 (66%), Positives = 105/123 (85%), Gaps = 6/123 (4%)
 Frame = -3

Query: 1137 THDEFLDHD---VLDHPIWYIRTIGLQPSVISAITVVKYSKSDGLIEGTDCSVCLSDFQE 967
            +HD+F+D D   V+DHPIWYIRT+GLQPSVISAIT+ KY + DGL+EGT+CSVCL++F+E
Sbjct: 33   SHDDFIDEDQEPVVDHPIWYIRTVGLQPSVISAITICKYKRGDGLVEGTECSVCLAEFEE 92

Query: 966  DETLRLLPKCNHAFHISCIDTWLRSHTNCPLCRAGIVKNT---PTSDQNLDDSGAMEETQ 796
            DE +RLLPKCNHAFHI CIDTWL SHTNCP+CRAGIV +T   P+ +Q++++SG +EE +
Sbjct: 93   DEAVRLLPKCNHAFHIPCIDTWLSSHTNCPMCRAGIVSSTAGAPSPEQSVENSGPLEEAR 152

Query: 795  VAI 787
            V I
Sbjct: 153  VEI 155


>ref|XP_002323964.1| predicted protein [Populus trichocarpa] gi|222866966|gb|EEF04097.1|
            predicted protein [Populus trichocarpa]
          Length = 172

 Score =  177 bits (448), Expect = 6e-42
 Identities = 90/174 (51%), Positives = 116/174 (66%), Gaps = 3/174 (1%)
 Frame = -3

Query: 1110 VLDHPIWYIRTIGLQPSVISAITVVKYSKSDGLIEGTDCSVCLSDFQEDETLRLLPKCNH 931
            V+DHPIWYIRT+GLQPSVIS+ITV KY   DGL+EGT+CSVCL++FQ+DETLRLLPKC+H
Sbjct: 1    VVDHPIWYIRTVGLQPSVISSITVCKYKSGDGLVEGTECSVCLNEFQDDETLRLLPKCSH 60

Query: 930  AFHISCIDTWLRSHTNCPLCRAGIVKNT---PTSDQNLDDSGAMEETQVAISIPXXXXXX 760
            AFHI CIDTWLRSHTNCPLCRA IV NT    +S  NL ++ + EETQ+ +         
Sbjct: 61   AFHIPCIDTWLRSHTNCPLCRAPIVTNTDEATSSQANLGNTSSGEETQIEV------LED 114

Query: 759  XXXXXXDYQSSELRIGVVDEEDLNKXXXXXXXXXXDFLIMRRSVSLNDYAACRI 598
                  + +  ++ + +V EE+                 +RRSVSL+  +A +I
Sbjct: 115  DQESDRETEGRDVELRIVTEEESRFQNENLNGEEDGIQQLRRSVSLDSLSAFKI 168


>ref|XP_002310500.1| predicted protein [Populus trichocarpa] gi|222853403|gb|EEE90950.1|
            predicted protein [Populus trichocarpa]
          Length = 153

 Score =  173 bits (439), Expect = 7e-41
 Identities = 79/112 (70%), Positives = 94/112 (83%), Gaps = 3/112 (2%)
 Frame = -3

Query: 1110 VLDHPIWYIRTIGLQPSVISAITVVKYSKSDGLIEGTDCSVCLSDFQEDETLRLLPKCNH 931
            V+DHPIWYIRT+GLQPSVI +I V KY   DGL+EGT+CSVCLS+FQ+DETLRLLPKC+H
Sbjct: 1    VVDHPIWYIRTVGLQPSVIGSIRVFKYKSGDGLVEGTECSVCLSEFQDDETLRLLPKCSH 60

Query: 930  AFHISCIDTWLRSHTNCPLCRAGIVKNT---PTSDQNLDDSGAMEETQVAIS 784
            AFHI CIDTWLRSHTNCPLCRA IV +T    +S  NLDD+ + EET++ +S
Sbjct: 61   AFHIPCIDTWLRSHTNCPLCRAPIVTSTAIATSSQANLDDTSSGEETRIEVS 112


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