BLASTX nr result

ID: Atractylodes21_contig00026758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026758
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   165   4e-39
ref|XP_002517743.1| conserved hypothetical protein [Ricinus comm...   156   1e-36
ref|XP_003615959.1| RING finger protein [Medicago truncatula] gi...   147   1e-33
ref|XP_004145301.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   146   2e-33
ref|XP_003518333.1| PREDICTED: E3 ubiquitin-protein ligase liste...   145   3e-33

>ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           listerin-like [Vitis vinifera]
          Length = 1923

 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/141 (58%), Positives = 103/141 (73%), Gaps = 3/141 (2%)
 Frame = -1

Query: 415 DELQEMHQQVXXXXXXXXXXXXXXXXS---EKHGSEDKSSELKHALKAKSTAVSRAEKLF 245
           DEL+EMHQQV                    EK G E  ++E KHA KA++TA+S AEKLF
Sbjct: 227 DELEEMHQQVISSSLLALATLIDILVGSQLEKPGFESITAEPKHASKARATAISFAEKLF 286

Query: 244 SVHKCFVDFLKSQSSAIRSAAYSLVRSCVKNIPHALNEANIKTLAPAILGAFNEKDPTCH 65
           S H+ F+DF+KSQS AIRSA YS++RSC+KNIPHA NE N+KTLA  ILG+F EKDP+CH
Sbjct: 287 SSHRYFLDFVKSQSPAIRSATYSMLRSCIKNIPHAFNEENMKTLASTILGSFQEKDPSCH 346

Query: 64  SSMWEAILLFSRRFPGSWTTL 2
           SSMW+A+LLFS+RFP SW ++
Sbjct: 347 SSMWDAMLLFSKRFPDSWRSV 367


>ref|XP_002517743.1| conserved hypothetical protein [Ricinus communis]
           gi|223543141|gb|EEF44675.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1912

 Score =  156 bits (395), Expect = 1e-36
 Identities = 80/139 (57%), Positives = 98/139 (70%), Gaps = 3/139 (2%)
 Frame = -1

Query: 415 DELQEMHQQVXXXXXXXXXXXXXXXXS---EKHGSEDKSSELKHALKAKSTAVSRAEKLF 245
           DEL++MHQQV                    E+ G E+ ++ELK+A KA++TA+S AEKL 
Sbjct: 209 DELEDMHQQVISSSLLALATLLDVLVCVQSERPGFENVAAELKYASKARATAISFAEKLL 268

Query: 244 SVHKCFVDFLKSQSSAIRSAAYSLVRSCVKNIPHALNEANIKTLAPAILGAFNEKDPTCH 65
           S HK F+DF+KS S  IRSA YS ++S +KNIPHA NE N+K LA AILGAF EKDPTCH
Sbjct: 269 SAHKYFLDFMKSHSPVIRSATYSALKSFMKNIPHAFNEGNMKVLAAAILGAFQEKDPTCH 328

Query: 64  SSMWEAILLFSRRFPGSWT 8
           SSMW+A LLFS+RFP SWT
Sbjct: 329 SSMWDAFLLFSKRFPESWT 347


>ref|XP_003615959.1| RING finger protein [Medicago truncatula]
           gi|355517294|gb|AES98917.1| RING finger protein
           [Medicago truncatula]
          Length = 1683

 Score =  147 bits (370), Expect = 1e-33
 Identities = 78/141 (55%), Positives = 98/141 (69%), Gaps = 3/141 (2%)
 Frame = -1

Query: 415 DELQEMHQQVXXXXXXXXXXXXXXXXS---EKHGSEDKSSELKHALKAKSTAVSRAEKLF 245
           DEL+EM+QQV                S   E+   E+ ++E KHA KA+  AVS  EKL 
Sbjct: 22  DELEEMYQQVISSTLLALASLLDVLISPQQEQPAFENITTEPKHASKARVAAVSFGEKLL 81

Query: 244 SVHKCFVDFLKSQSSAIRSAAYSLVRSCVKNIPHALNEANIKTLAPAILGAFNEKDPTCH 65
             HK F++FLKSQ   IRSA Y++++S +KN+PHA+ E NIK+LA AILGAFNEKDPTCH
Sbjct: 82  IDHKHFLEFLKSQRPTIRSATYTVLKSFIKNMPHAITEGNIKSLAGAILGAFNEKDPTCH 141

Query: 64  SSMWEAILLFSRRFPGSWTTL 2
            SMW+ ILLFSRRFPGSW++L
Sbjct: 142 PSMWDVILLFSRRFPGSWSSL 162


>ref|XP_004145301.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           listerin-like [Cucumis sativus]
          Length = 1919

 Score =  146 bits (368), Expect = 2e-33
 Identities = 77/141 (54%), Positives = 96/141 (68%), Gaps = 5/141 (3%)
 Frame = -1

Query: 415 DELQEMHQQVXXXXXXXXXXXXXXXXS---EKHGSEDKSSELKHALKAKS--TAVSRAEK 251
           DEL+EMHQQV                S   E+ G+   S E KHA K++S  TA+S AEK
Sbjct: 228 DELEEMHQQVISSSLLALATLIDVLVSGRSERSGTGKSSGETKHASKSRSRETAISFAEK 287

Query: 250 LFSVHKCFVDFLKSQSSAIRSAAYSLVRSCVKNIPHALNEANIKTLAPAILGAFNEKDPT 71
           LF+ HK F+D LKS+S+ +R A YS++RS VKNIPHA  E N+KT+A +ILGAF EKDP+
Sbjct: 288 LFTEHKYFIDLLKSKSNIVRFATYSVMRSLVKNIPHAFKEQNMKTIAGSILGAFQEKDPS 347

Query: 70  CHSSMWEAILLFSRRFPGSWT 8
           CHS MWEA+LLFS+R P  WT
Sbjct: 348 CHSPMWEAVLLFSKRLPNCWT 368


>ref|XP_003518333.1| PREDICTED: E3 ubiquitin-protein ligase listerin-like [Glycine max]
          Length = 1885

 Score =  145 bits (367), Expect = 3e-33
 Identities = 74/141 (52%), Positives = 97/141 (68%), Gaps = 3/141 (2%)
 Frame = -1

Query: 415 DELQEMHQQVXXXXXXXXXXXXXXXXS---EKHGSEDKSSELKHALKAKSTAVSRAEKLF 245
           DEL+E++QQV                    ++ G E  +SE KHA KA+  AVS AEKLF
Sbjct: 214 DELEEIYQQVISSTLLALATLLDVLICLQQDQPGFESITSEPKHASKARVAAVSFAEKLF 273

Query: 244 SVHKCFVDFLKSQSSAIRSAAYSLVRSCVKNIPHALNEANIKTLAPAILGAFNEKDPTCH 65
             HK F+DFL+SQ   IRSA YS+++S +KN+P A+N+ N+KT+A AILGAFNEKDPTCH
Sbjct: 274 KDHKYFLDFLRSQRPTIRSATYSVLKSLIKNVPQAINDGNMKTVAGAILGAFNEKDPTCH 333

Query: 64  SSMWEAILLFSRRFPGSWTTL 2
            SMW+ I+LFSR+FP  W++L
Sbjct: 334 PSMWDLIILFSRKFPDGWSSL 354


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