BLASTX nr result

ID: Atractylodes21_contig00026661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026661
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi...   236   1e-60
ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|2...   225   3e-57
ref|XP_004167767.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   224   7e-57
ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containi...   224   7e-57
ref|XP_002525196.1| pentatricopeptide repeat-containing protein,...   223   1e-56

>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
           chloroplastic [Vitis vinifera]
           gi|297741486|emb|CBI32618.3| unnamed protein product
           [Vitis vinifera]
          Length = 842

 Score =  236 bits (603), Expect = 1e-60
 Identities = 114/150 (76%), Positives = 131/150 (87%)
 Frame = +2

Query: 5   IYKHMQILGVAPDMASYNILLKSCCLAARVDLAQEIYREVEYLESRGSLKLDVFTYSTMI 184
           +YK+MQ LGV  DMASYNILLK+CC+A RVDLAQEIYREV+ LES G LKLDVFTYST+I
Sbjct: 300 VYKNMQNLGVTADMASYNILLKACCVAGRVDLAQEIYREVQNLESNGMLKLDVFTYSTII 359

Query: 185 KVFADARMWQMALGMKEKMLEAGVTPNTVTWSSLISACAKAGLVDQAFVLFEEMLLANCM 364
           KVFADA++WQMAL +KE ML AGV PNTVTWS+LIS+CA AG+ +QA  LF+EMLLA C 
Sbjct: 360 KVFADAKLWQMALKIKEDMLSAGVIPNTVTWSALISSCANAGITEQAIQLFKEMLLAGCE 419

Query: 365 PNSQCCNVLLYACVKAFQYDRAFRLFQSWK 454
           PNSQC N+LL+ACV+A QYDRAFRLFQSWK
Sbjct: 420 PNSQCYNILLHACVEACQYDRAFRLFQSWK 449


>ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|222833355|gb|EEE71832.1|
           predicted protein [Populus trichocarpa]
          Length = 828

 Score =  225 bits (573), Expect = 3e-57
 Identities = 107/150 (71%), Positives = 127/150 (84%)
 Frame = +2

Query: 5   IYKHMQILGVAPDMASYNILLKSCCLAARVDLAQEIYREVEYLESRGSLKLDVFTYSTMI 184
           ++K+MQ LGV  D+ASYNILLK+CC+A RVDLA++IYREV+ LES   LKLDVFTY  ++
Sbjct: 312 VFKNMQNLGVTADVASYNILLKACCIAGRVDLAKDIYREVKQLESAEVLKLDVFTYCMIV 371

Query: 185 KVFADARMWQMALGMKEKMLEAGVTPNTVTWSSLISACAKAGLVDQAFVLFEEMLLANCM 364
           K+FADA+MWQMAL +KE ML +GVTPN   WSSLISACA AGLV+QA  LFEEMLL+ C 
Sbjct: 372 KIFADAKMWQMALKIKEDMLSSGVTPNMHIWSSLISACANAGLVEQAIQLFEEMLLSGCK 431

Query: 365 PNSQCCNVLLYACVKAFQYDRAFRLFQSWK 454
           PNSQCCN+LL+ACV+A QYDRAFRLFQ WK
Sbjct: 432 PNSQCCNILLHACVQACQYDRAFRLFQCWK 461


>ref|XP_004167767.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g02830, chloroplastic-like [Cucumis sativus]
          Length = 855

 Score =  224 bits (570), Expect = 7e-57
 Identities = 106/150 (70%), Positives = 129/150 (86%)
 Frame = +2

Query: 5   IYKHMQILGVAPDMASYNILLKSCCLAARVDLAQEIYREVEYLESRGSLKLDVFTYSTMI 184
           +YK+MQ LGV  DMASYNILLK+CCLA RVDLAQ+IYREV++LE+ G LKLDVFTYST++
Sbjct: 316 LYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREVKHLETTGVLKLDVFTYSTIV 375

Query: 185 KVFADARMWQMALGMKEKMLEAGVTPNTVTWSSLISACAKAGLVDQAFVLFEEMLLANCM 364
           KVFADA++W+MAL +KE M  AGV+PN VTWSSLIS+CA +GLV+ A  LFEEM+ A C 
Sbjct: 376 KVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSAGCE 435

Query: 365 PNSQCCNVLLYACVKAFQYDRAFRLFQSWK 454
           PN+QCCN LL+ACV+  Q+DRAFRLF+SWK
Sbjct: 436 PNTQCCNTLLHACVEGRQFDRAFRLFRSWK 465


>ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  224 bits (570), Expect = 7e-57
 Identities = 106/150 (70%), Positives = 129/150 (86%)
 Frame = +2

Query: 5   IYKHMQILGVAPDMASYNILLKSCCLAARVDLAQEIYREVEYLESRGSLKLDVFTYSTMI 184
           +YK+MQ LGV  DMASYNILLK+CCLA RVDLAQ+IYREV++LE+ G LKLDVFTYST++
Sbjct: 316 LYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREVKHLETTGVLKLDVFTYSTIV 375

Query: 185 KVFADARMWQMALGMKEKMLEAGVTPNTVTWSSLISACAKAGLVDQAFVLFEEMLLANCM 364
           KVFADA++W+MAL +KE M  AGV+PN VTWSSLIS+CA +GLV+ A  LFEEM+ A C 
Sbjct: 376 KVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSAGCE 435

Query: 365 PNSQCCNVLLYACVKAFQYDRAFRLFQSWK 454
           PN+QCCN LL+ACV+  Q+DRAFRLF+SWK
Sbjct: 436 PNTQCCNTLLHACVEGRQFDRAFRLFRSWK 465


>ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535493|gb|EEF37162.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 786

 Score =  223 bits (568), Expect = 1e-56
 Identities = 108/150 (72%), Positives = 124/150 (82%)
 Frame = +2

Query: 5   IYKHMQILGVAPDMASYNILLKSCCLAARVDLAQEIYREVEYLESRGSLKLDVFTYSTMI 184
           +YK MQ LGV  DM SYNILLKSC LA +VDLAQ+IYRE + LE  G LKLD FTY T+I
Sbjct: 244 VYKKMQNLGVTADMTSYNILLKSCSLAGKVDLAQDIYREAKQLELAGLLKLDDFTYCTII 303

Query: 185 KVFADARMWQMALGMKEKMLEAGVTPNTVTWSSLISACAKAGLVDQAFVLFEEMLLANCM 364
           K+FADA++WQ+AL +KE ML +GVTPNT TWSSLISA A AGLVDQA  LFEEMLLA C+
Sbjct: 304 KIFADAKLWQLALKIKEDMLSSGVTPNTFTWSSLISASANAGLVDQAIKLFEEMLLAGCV 363

Query: 365 PNSQCCNVLLYACVKAFQYDRAFRLFQSWK 454
           PNS CCN+LL+ACV+A QYDRAFRLF +WK
Sbjct: 364 PNSHCCNILLHACVEACQYDRAFRLFNAWK 393


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