BLASTX nr result

ID: Atractylodes21_contig00026654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026654
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    99   5e-19
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]    99   5e-19
ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    88   6e-16
ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    87   2e-15
ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    86   4e-15

>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 58/115 (50%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
 Frame = -3

Query: 337 EMSRTTAASYWCYRCTRFVRVPAEDTVVCPYCEGGFVEAVEASEAPPLGTRRRFPATAMY 158
           EM+ TT  SYWC+RCTRFVRV A+D++VCPYCE GF+E +EA+        RRFPATAMY
Sbjct: 2   EMASTT--SYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEATPRSE-NHHRRFPATAMY 58

Query: 157 M----XXXXXXXXXXXXXXXXXXXXXXSPFNPVIVLRGPAEGSGPVEDSGGGERG 5
           M                          SPFNPVIVLRGPA+G       GGGE G
Sbjct: 59  MLGNNRPDSEQSANLGLRRSRRNAGDRSPFNPVIVLRGPADG-------GGGEGG 106


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 58/115 (50%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
 Frame = -3

Query: 337 EMSRTTAASYWCYRCTRFVRVPAEDTVVCPYCEGGFVEAVEASEAPPLGTRRRFPATAMY 158
           EM+ TT  SYWC+RCTRFVRV A+D++VCPYCE GF+E +EA+        RRFPATAMY
Sbjct: 112 EMASTT--SYWCHRCTRFVRVWAQDSIVCPYCESGFLEEIEATPRSE-NHHRRFPATAMY 168

Query: 157 M----XXXXXXXXXXXXXXXXXXXXXXSPFNPVIVLRGPAEGSGPVEDSGGGERG 5
           M                          SPFNPVIVLRGPA+G       GGGE G
Sbjct: 169 MLGNNRPDSEQSANLGLRRSRRNAGDRSPFNPVIVLRGPADG-------GGGEGG 216


>ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
           gi|449527992|ref|XP_004170991.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 378

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 49/108 (45%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
 Frame = -3

Query: 325 TTAASYWCYRCTRFVRVPAEDTVVCPYCEGGFVEAVE-ASEAPPLGTRRRFPATAMY-MX 152
           T  ASYWCYRC RFVR  A+D++ CPYC+GGFVEA+E AS  PP    RR   +A++ + 
Sbjct: 3   TGTASYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHTLD 62

Query: 151 XXXXXXXXXXXXXXXXXXXXXSPFNPVIVLRGPAEGSGPVEDSGGGER 8
                                S FNPV+VLRG A+    V   GGGER
Sbjct: 63  QDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVV---GGGER 107


>ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 383

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 55/123 (44%), Positives = 63/123 (51%), Gaps = 17/123 (13%)
 Frame = -3

Query: 331 SRTTAASYWCYRCTRFVRVPAEDTVVCPYCEGGFVEAVEAS------EAPPLGTRRRFPA 170
           S   A+SYWC+RC+ FVRV  +D+VVCP C  GFVE +E        EA P   RRRFPA
Sbjct: 3   SMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAP---RRRFPA 59

Query: 169 TAMYM---XXXXXXXXXXXXXXXXXXXXXXSPFNPVIVLRGPAEGSGPVE--------DS 23
            AMYM                         SPFNPVIVLRGP++GS   E        D 
Sbjct: 60  AAMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDD 119

Query: 22  GGG 14
           GGG
Sbjct: 120 GGG 122


>ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 380

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 54/119 (45%), Positives = 62/119 (52%), Gaps = 17/119 (14%)
 Frame = -3

Query: 319 AASYWCYRCTRFVRVPAEDTVVCPYCEGGFVEAVEAS------EAPPLGTRRRFPATAMY 158
           A+SYWC+RC+ FVRV  +D+VVCP C  GFVE +E        EA P   RRRFPA AMY
Sbjct: 4   ASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAP---RRRFPAAAMY 60

Query: 157 M---XXXXXXXXXXXXXXXXXXXXXXSPFNPVIVLRGPAEGSGPVE--------DSGGG 14
           M                         SPFNPVIVLRGP++GS   E        D GGG
Sbjct: 61  MIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDGGG 119


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