BLASTX nr result

ID: Atractylodes21_contig00026604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026604
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    65   4e-09
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    64   1e-08
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    62   6e-08

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
 Frame = +3

Query: 9   DFKSPFNSGPTIRSPSVRSDLDRSTFGSRPNL--------GGTGEASPNRQRGLRSLTRT 164
           D    F SG +  +PS ++  + S   S  +L        GG    + +R +G+RS+   
Sbjct: 264 DATRSFQSGGS--NPSQKTGPNGSNTNSTSSLFSSARRVDGGPRSGTTDRWKGIRSIHNE 321

Query: 165 EWEERRRKGLCFRCGQQYGPT-HKCPEGKLRVLLLG 269
           E+EERR KGLCF+CG +Y PT HKC E  LRVL+LG
Sbjct: 322 EFEERRAKGLCFKCGGKYHPTFHKCLERALRVLILG 357


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = +3

Query: 87   GSRPNLGGTGEASPNRQRGLRSLTRTEWEERRRKGLCFRCGQQYGPT-HKCPEGKLRVLL 263
            G RP     G     R +G+RS+   E  ERR KGLCF+CG +Y PT HKCPE  LRVL+
Sbjct: 905  GGRPYGKKHGGDRVERWKGVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLI 964

Query: 264  LG 269
            LG
Sbjct: 965  LG 966


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 16/101 (15%)
 Frame = +3

Query: 15  KSPFNSGPTIRSPSVR-SDLDRSTFGSRPN------LGGTGEASPNRQR--------GLR 149
           +S  N    IRSP++  S+  + T  S  N      L  TG       R        G+R
Sbjct: 241 RSGLNPRDPIRSPNLGWSNPTQKTGSSGSNTISTLSLASTGRKGETDTRTGVSEKWKGVR 300

Query: 150 SLTRTEWEERRRKGLCFRCGQQYGPT-HKCPEGKLRVLLLG 269
           S+   E  ERR KGLCF+CG +Y PT HKCPE  LRVL+LG
Sbjct: 301 SIRNNEMAERRAKGLCFKCGGKYHPTLHKCPERALRVLILG 341


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