BLASTX nr result

ID: Atractylodes21_contig00026579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026579
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   125   4e-27
emb|CBI40768.3| unnamed protein product [Vitis vinifera]              125   4e-27
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   124   8e-27
ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homol...   120   9e-26
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...   114   6e-24

>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  125 bits (314), Expect = 4e-27
 Identities = 54/83 (65%), Positives = 66/83 (79%)
 Frame = -3

Query: 273 TFRDPQSARRACVDPTPVIDGRRANCNLASFGRPQHTLPFGSIRSPMPFGGGMPAVRGPY 94
           TFRDP+SARRAC+DP P+IDGRRANCNLAS GRP+ ++ +G +R   P+ G +PA RG Y
Sbjct: 79  TFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMSYGRLRPVTPYLGSVPATRGSY 138

Query: 93  FGSYGYQQPVPYSYQAGLTYPSY 25
            G++GYQQPV YSYQ G  YPSY
Sbjct: 139 VGNFGYQQPVSYSYQQGFMYPSY 161


>emb|CBI40768.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score =  125 bits (314), Expect = 4e-27
 Identities = 54/83 (65%), Positives = 66/83 (79%)
 Frame = -3

Query: 273 TFRDPQSARRACVDPTPVIDGRRANCNLASFGRPQHTLPFGSIRSPMPFGGGMPAVRGPY 94
           TFRDP+SARRAC+DP P+IDGRRANCNLAS GRP+ ++ +G +R   P+ G +PA RG Y
Sbjct: 79  TFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMSYGRLRPVTPYLGSVPATRGSY 138

Query: 93  FGSYGYQQPVPYSYQAGLTYPSY 25
            G++GYQQPV YSYQ G  YPSY
Sbjct: 139 VGNFGYQQPVSYSYQQGFMYPSY 161


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/83 (66%), Positives = 63/83 (75%)
 Frame = -3

Query: 273 TFRDPQSARRACVDPTPVIDGRRANCNLASFGRPQHTLPFGSIRSPMPFGGGMPAVRGPY 94
           TFRDP++ARRAC DP+PVIDGRRANCNLAS GRP+  LP+G IR   P+ G +   RG Y
Sbjct: 79  TFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPLPYGRIRPASPYVGSLQPARGAY 138

Query: 93  FGSYGYQQPVPYSYQAGLTYPSY 25
            G +GYQQPV YSYQ GL YP Y
Sbjct: 139 VGGFGYQQPVSYSYQQGLVYPPY 161


>ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cucumis
           sativus] gi|449531145|ref|XP_004172548.1| PREDICTED:
           RNA-binding protein Musashi homolog 2-like [Cucumis
           sativus]
          Length = 286

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/89 (62%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
 Frame = -3

Query: 273 TFRDPQSARRACVDPTPVIDGRRANCNLASFGRPQHTLPFGS--IRSPMPFGGGMPAVRG 100
           TFRDP+SARRAC DPTP+IDGRRANCNLAS GRP+  L +G+  +R P  + GGM   RG
Sbjct: 79  TFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPLSYGTGRLRQPAVYVGGMQPNRG 138

Query: 99  PYFGSYGYQQPVPYSYQAGLTYPSYSEFT 13
            Y G++GYQQPV Y+YQ GL YP Y   T
Sbjct: 139 TYIGNFGYQQPVSYAYQQGLAYPPYGYAT 167


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
           max]
          Length = 293

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/95 (60%), Positives = 64/95 (67%), Gaps = 8/95 (8%)
 Frame = -3

Query: 273 TFRDPQSARRACVDPTPVIDGRRANCNLASFGRPQHTLPFG-------SIRSPMPFGGGM 115
           TFRDP++ARRAC DPTPVIDGRRANCNLAS GRP+  LP+G        IR   P+ G +
Sbjct: 79  TFRDPEAARRACADPTPVIDGRRANCNLASLGRPRPPLPYGIVLCLIRRIRPASPYVGSL 138

Query: 114 PAVRGPYFGSYGY-QQPVPYSYQAGLTYPSYSEFT 13
              RG Y G +GY QQPV YSYQ GL YP Y   T
Sbjct: 139 QPARGAYVGGFGYQQQPVSYSYQQGLVYPPYGYTT 173


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