BLASTX nr result

ID: Atractylodes21_contig00026501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00026501
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281073.1| PREDICTED: histone H3-like centromeric prote...   149   3e-34
dbj|BAH03515.1| centromere specific histone H3 variant [Nicotian...   141   5e-32
dbj|BAH03514.1| centromere specific histone H3 variant [Nicotian...   140   8e-32
ref|XP_004154492.1| PREDICTED: uncharacterized protein LOC101227...   137   1e-30
ref|XP_004139661.1| PREDICTED: histone H3-like centromeric prote...   137   1e-30

>ref|XP_002281073.1| PREDICTED: histone H3-like centromeric protein HTR12 [Vitis
           vinifera] gi|297745416|emb|CBI40496.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/109 (65%), Positives = 85/109 (77%)
 Frame = +3

Query: 102 SGAGERQRRHRFKPGTQALREIRRLQKTVNLLIPAAPFIRTVKEISNYIAPEVTRWXXXX 281
           +G+  +++  R++PGT ALREIRR QKT +LLIPAAPFIRTV+EIS + APE++RW    
Sbjct: 48  TGSQGQRKPFRYRPGTVALREIRRFQKTTHLLIPAAPFIRTVREISYFFAPEISRWTAEA 107

Query: 282 XXXXXXXXXDYLVQLFEDSMLCAIHAKRVTLMKKDWELARRLGKKGQPW 428
                    DYLV LFED+MLCAIHAKRVTLMKKDWELARR+G KGQPW
Sbjct: 108 LVALQEAAEDYLVHLFEDAMLCAIHAKRVTLMKKDWELARRIGGKGQPW 156


>dbj|BAH03515.1| centromere specific histone H3 variant [Nicotiana tabacum]
           gi|218744596|dbj|BAH03516.1| centromere specific histone
           H3 variant [Nicotiana sylvestris]
          Length = 157

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/104 (67%), Positives = 81/104 (77%)
 Frame = +3

Query: 117 RQRRHRFKPGTQALREIRRLQKTVNLLIPAAPFIRTVKEISNYIAPEVTRWXXXXXXXXX 296
           ++++ R++PGT ALREIRR QKT NLLIPAAPFIR VKEIS + APEVTRW         
Sbjct: 54  QKKKTRYRPGTVALREIRRFQKTWNLLIPAAPFIRLVKEISYFFAPEVTRWQAEALIALQ 113

Query: 297 XXXXDYLVQLFEDSMLCAIHAKRVTLMKKDWELARRLGKKGQPW 428
               D+LV LF+DSMLCAIHAKRVTLMKKD+ELARRLG K +PW
Sbjct: 114 EAAEDFLVHLFDDSMLCAIHAKRVTLMKKDFELARRLGGKARPW 157


>dbj|BAH03514.1| centromere specific histone H3 variant [Nicotiana tabacum]
           gi|218744598|dbj|BAH03517.1| centromere specific histone
           H3 variant [Nicotiana tomentosiformis]
          Length = 156

 Score =  140 bits (354), Expect = 8e-32
 Identities = 69/104 (66%), Positives = 82/104 (78%)
 Frame = +3

Query: 117 RQRRHRFKPGTQALREIRRLQKTVNLLIPAAPFIRTVKEISNYIAPEVTRWXXXXXXXXX 296
           ++++ R++PGT ALREIRR QKT +LLIPAAPFIR VKEIS++ APEVTRW         
Sbjct: 53  QKKKTRYRPGTVALREIRRFQKTWDLLIPAAPFIRLVKEISHFFAPEVTRWQAEALIALQ 112

Query: 297 XXXXDYLVQLFEDSMLCAIHAKRVTLMKKDWELARRLGKKGQPW 428
               D+LV LF+DSMLCAIHAKRVTLMKKD+ELARRLG K +PW
Sbjct: 113 EAAEDFLVHLFDDSMLCAIHAKRVTLMKKDFELARRLGGKARPW 156


>ref|XP_004154492.1| PREDICTED: uncharacterized protein LOC101227719 [Cucumis sativus]
          Length = 323

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/103 (63%), Positives = 81/103 (78%)
 Frame = +3

Query: 120 QRRHRFKPGTQALREIRRLQKTVNLLIPAAPFIRTVKEISNYIAPEVTRWXXXXXXXXXX 299
           +++ RF+PGT AL+EIR LQK+ NLLIPA+ FIR VKE+SN +AP++TRW          
Sbjct: 221 KKKKRFRPGTVALKEIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE 280

Query: 300 XXXDYLVQLFEDSMLCAIHAKRVTLMKKDWELARRLGKKGQPW 428
              D+LV LFED+MLCAIHAKRVT+MKKD+ELARRLG KG+PW
Sbjct: 281 AAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 323


>ref|XP_004139661.1| PREDICTED: histone H3-like centromeric protein HTR12-like [Cucumis
           sativus]
          Length = 154

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/103 (63%), Positives = 81/103 (78%)
 Frame = +3

Query: 120 QRRHRFKPGTQALREIRRLQKTVNLLIPAAPFIRTVKEISNYIAPEVTRWXXXXXXXXXX 299
           +++ RF+PGT AL+EIR LQK+ NLLIPA+ FIR VKE+SN +AP++TRW          
Sbjct: 52  KKKKRFRPGTVALKEIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQE 111

Query: 300 XXXDYLVQLFEDSMLCAIHAKRVTLMKKDWELARRLGKKGQPW 428
              D+LV LFED+MLCAIHAKRVT+MKKD+ELARRLG KG+PW
Sbjct: 112 AAEDFLVHLFEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154


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