BLASTX nr result

ID: Atractylodes21_contig00025965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025965
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   114   8e-24
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   114   8e-24
ref|XP_002533325.1| FACT complex subunit SPT16, putative [Ricinu...   112   3e-23
gb|EEE60743.1| hypothetical protein OsJ_14286 [Oryza sativa Japo...   110   1e-22
gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japo...   110   1e-22

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/83 (66%), Positives = 63/83 (75%)
 Frame = +1

Query: 4   IDASTLVRRLKSMYSHWREHRDELWGSSNAFVIATXXXXXXXXXLRYLKSSALNIWLLGY 183
           I+     +RLK++YSHW+EH  +LWGSS+A  IAT         LRYLKSSALNIWLLGY
Sbjct: 25  INLDNFTKRLKTLYSHWKEHSSDLWGSSDALAIATPPASDD---LRYLKSSALNIWLLGY 81

Query: 184 EFPDTIMVFSDKQIHFLCSQKKA 252
           EFP+TIMVF  KQIHFLCSQKKA
Sbjct: 82  EFPETIMVFMKKQIHFLCSQKKA 104


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/83 (66%), Positives = 63/83 (75%)
 Frame = +1

Query: 4   IDASTLVRRLKSMYSHWREHRDELWGSSNAFVIATXXXXXXXXXLRYLKSSALNIWLLGY 183
           I+     +RLK++YSHW+EH  +LWGSS+A  IAT         LRYLKSSALNIWLLGY
Sbjct: 25  INLDNFTKRLKTLYSHWKEHSSDLWGSSDALAIATPPASDD---LRYLKSSALNIWLLGY 81

Query: 184 EFPDTIMVFSDKQIHFLCSQKKA 252
           EFP+TIMVF  KQIHFLCSQKKA
Sbjct: 82  EFPETIMVFMKKQIHFLCSQKKA 104


>ref|XP_002533325.1| FACT complex subunit SPT16, putative [Ricinus communis]
           gi|223526847|gb|EEF29061.1| FACT complex subunit SPT16,
           putative [Ricinus communis]
          Length = 1050

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/82 (64%), Positives = 63/82 (76%)
 Frame = +1

Query: 4   IDASTLVRRLKSMYSHWREHRDELWGSSNAFVIATXXXXXXXXXLRYLKSSALNIWLLGY 183
           I+ +    RLK +YSHW EH+DELWGS++A  IAT         LRYLKSSA+N+WLLGY
Sbjct: 13  INTNKFKSRLKLLYSHWNEHKDELWGSADAIAIATPPPSED---LRYLKSSAMNVWLLGY 69

Query: 184 EFPDTIMVFSDKQIHFLCSQKK 249
           EFP+TIMVF+ KQIHFLCSQKK
Sbjct: 70  EFPETIMVFTKKQIHFLCSQKK 91


>gb|EEE60743.1| hypothetical protein OsJ_14286 [Oryza sativa Japonica Group]
          Length = 430

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/84 (63%), Positives = 61/84 (72%)
 Frame = +1

Query: 1   TIDASTLVRRLKSMYSHWREHRDELWGSSNAFVIATXXXXXXXXXLRYLKSSALNIWLLG 180
           TI+     +RLK  Y HW+EH  +LWGSSNA  IAT         LRYLKSSAL++WLLG
Sbjct: 18  TINLDNFSKRLKVFYDHWKEHNSDLWGSSNAIAIATPPPSED---LRYLKSSALDVWLLG 74

Query: 181 YEFPDTIMVFSDKQIHFLCSQKKA 252
           YEFP+TI+VF  KQIHFLCSQKKA
Sbjct: 75  YEFPETIIVFMHKQIHFLCSQKKA 98


>gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japonica Group]
          Length = 1056

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/84 (63%), Positives = 61/84 (72%)
 Frame = +1

Query: 1   TIDASTLVRRLKSMYSHWREHRDELWGSSNAFVIATXXXXXXXXXLRYLKSSALNIWLLG 180
           TI+     +RLK  Y HW+EH  +LWGSSNA  IAT         LRYLKSSAL++WLLG
Sbjct: 18  TINLDNFSKRLKVFYDHWKEHNSDLWGSSNAIAIATPPPSED---LRYLKSSALDVWLLG 74

Query: 181 YEFPDTIMVFSDKQIHFLCSQKKA 252
           YEFP+TI+VF  KQIHFLCSQKKA
Sbjct: 75  YEFPETIIVFMHKQIHFLCSQKKA 98


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