BLASTX nr result

ID: Atractylodes21_contig00025876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025876
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containi...   189   2e-46
ref|XP_002308660.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_003588753.1| Pentatricopeptide repeat-containing protein ...   167   1e-39
ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39

>ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
           gi|296082021|emb|CBI21026.3| unnamed protein product
           [Vitis vinifera]
          Length = 583

 Score =  189 bits (481), Expect = 2e-46
 Identities = 89/112 (79%), Positives = 100/112 (89%)
 Frame = +2

Query: 2   IEHYGCMVDLFSRAGLVKEALEFVNKMPIEPNPIIWRTLTAACRLHGELNLGESITKQLI 181
           IEHYGCMVDL SRAGLV EALEFV +MPIEPNPIIWRTL +ACR+HGEL LGESI+KQLI
Sbjct: 348 IEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLI 407

Query: 182 ETEPLHESNYVLLSNIYGKMSHWEKKNTIREVMGEKGMRKIPGSTMIELDNK 337
             EP+HESNYVLLSNIYGKM  WEKK+ IR  MG+KG++K+PGSTMIELDN+
Sbjct: 408 RNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNE 459


>ref|XP_002308660.1| predicted protein [Populus trichocarpa] gi|222854636|gb|EEE92183.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  183 bits (464), Expect = 1e-44
 Identities = 85/112 (75%), Positives = 95/112 (84%)
 Frame = +2

Query: 2   IEHYGCMVDLFSRAGLVKEALEFVNKMPIEPNPIIWRTLTAACRLHGELNLGESITKQLI 181
           IEHYGCMVD+  RAGLVKEAL+FV +MPI+PNP++WRTL  ACR HGEL LGE IT+QLI
Sbjct: 252 IEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLI 311

Query: 182 ETEPLHESNYVLLSNIYGKMSHWEKKNTIREVMGEKGMRKIPGSTMIELDNK 337
             EP+HESNYVLLSNIY KMS WEKK  IRE M  KGM+KIPGSTMIELDN+
Sbjct: 312 RNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNE 363


>ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
           gi|449529652|ref|XP_004171812.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 606

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/112 (73%), Positives = 92/112 (82%)
 Frame = +2

Query: 2   IEHYGCMVDLFSRAGLVKEALEFVNKMPIEPNPIIWRTLTAACRLHGELNLGESITKQLI 181
           IEHYGCMVD++ R GLVKEALEFV  MPIEPNP+I RTL +ACR HGE  LGE ITK L+
Sbjct: 371 IEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLM 430

Query: 182 ETEPLHESNYVLLSNIYGKMSHWEKKNTIREVMGEKGMRKIPGSTMIELDNK 337
           + EPLHESNYVLLSNIY K   WEKK  IREVM  KGM+K+PGSTMIE+DN+
Sbjct: 431 KHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNE 482


>ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477801|gb|AES59004.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 600

 Score =  167 bits (422), Expect = 1e-39
 Identities = 75/112 (66%), Positives = 91/112 (81%)
 Frame = +2

Query: 2   IEHYGCMVDLFSRAGLVKEALEFVNKMPIEPNPIIWRTLTAACRLHGELNLGESITKQLI 181
           +EHYGCMVDL  R G VKEA EFV KMP EPN IIWRT+  AC   GEL LGESI+K+LI
Sbjct: 365 VEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELI 424

Query: 182 ETEPLHESNYVLLSNIYGKMSHWEKKNTIREVMGEKGMRKIPGSTMIELDNK 337
           ++EP+HESNYVLLSNIY K+  WEKK  +RE+M  +GM+K+PGSTMIE++N+
Sbjct: 425 KSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNE 476


>ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 705

 Score =  166 bits (420), Expect = 2e-39
 Identities = 76/112 (67%), Positives = 89/112 (79%)
 Frame = +2

Query: 2   IEHYGCMVDLFSRAGLVKEALEFVNKMPIEPNPIIWRTLTAACRLHGELNLGESITKQLI 181
           IEHYGCMVD+ SRAG V EALEFV  MP+EPN +IWR++  AC   GEL LGES+ K+LI
Sbjct: 470 IEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELI 529

Query: 182 ETEPLHESNYVLLSNIYGKMSHWEKKNTIREVMGEKGMRKIPGSTMIELDNK 337
             EP HESNYVLLSNIY K+  WEKK  +RE+M  KGMRKIPGSTMIE++N+
Sbjct: 530 RREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNE 581


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