BLASTX nr result

ID: Atractylodes21_contig00025797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025797
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137655.1| PREDICTED: lamin-like protein-like [Cucumis ...   201   1e-49
ref|XP_002263869.1| PREDICTED: lamin-like protein [Vitis vinifer...   201   1e-49
ref|XP_004160339.1| PREDICTED: lamin-like protein-like [Cucumis ...   200   2e-49
emb|CAN70727.1| hypothetical protein VITISV_028080 [Vitis vinifera]   199   3e-49
ref|XP_002332055.1| predicted protein [Populus trichocarpa] gi|1...   197   1e-48

>ref|XP_004137655.1| PREDICTED: lamin-like protein-like [Cucumis sativus]
          Length = 171

 Score =  201 bits (510), Expect = 1e-49
 Identities = 88/103 (85%), Positives = 94/103 (91%)
 Frame = +2

Query: 77  DHIVGANRGWNPGINYTLWSNNHTFYVGDFISFRYVKTQYNVFEVNKTGYDNCTLDGAVG 256
           DHIVGANRGWNPGINYTLW+NNHTFYVGD ISFRY K QYNVFEVN+TGYDNCT++GA G
Sbjct: 27  DHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTIEGASG 86

Query: 257 NWSSGKDFILLNKSQRYYFICGTGGCFNGMKVTIRVHPLPSPP 385
           NWSSGKDFI L+K+QRYYFICG G CFNGMKVTI VHPLP PP
Sbjct: 87  NWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTILVHPLPPPP 129


>ref|XP_002263869.1| PREDICTED: lamin-like protein [Vitis vinifera]
           gi|298204685|emb|CBI25183.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  201 bits (510), Expect = 1e-49
 Identities = 93/147 (63%), Positives = 107/147 (72%), Gaps = 6/147 (4%)
 Frame = +2

Query: 77  DHIVGANRGWNPGINYTLWSNNHTFYVGDFISFRYVKTQYNVFEVNKTGYDNCTLDGAVG 256
           DHIVGANRGWNPGINYTLW+NNHTFYV D ISFRY K QYNVFEVN+TGYDNCT D A G
Sbjct: 22  DHIVGANRGWNPGINYTLWANNHTFYVNDLISFRYQKNQYNVFEVNQTGYDNCTTDSATG 81

Query: 257 NWSSGKDFILLNKSQRYYFICGTGGCFNGMKVTIRVHPLPSPPXXXXXXXXXXXXXXXGK 436
           NWSSGKDFILL+K++RYYFICG GGCF+GMKV++ VHPLP+PP                 
Sbjct: 82  NWSSGKDFILLDKAKRYYFICGNGGCFSGMKVSVLVHPLPTPPSASTAAAEISKPNSAAA 141

Query: 437 ------SIFNISFMVLASFIWLGSGAI 499
                 S+  +  ++   +IWLGSG I
Sbjct: 142 RAPRSGSMAFVGLVLWIGWIWLGSGWI 168


>ref|XP_004160339.1| PREDICTED: lamin-like protein-like [Cucumis sativus]
          Length = 171

 Score =  200 bits (509), Expect = 2e-49
 Identities = 87/103 (84%), Positives = 94/103 (91%)
 Frame = +2

Query: 77  DHIVGANRGWNPGINYTLWSNNHTFYVGDFISFRYVKTQYNVFEVNKTGYDNCTLDGAVG 256
           DHIVGANRGWNPGINYTLW+NNHTFYVGD ISFRY K QYNVFEVN+TGYDNCT++GA G
Sbjct: 27  DHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTIEGASG 86

Query: 257 NWSSGKDFILLNKSQRYYFICGTGGCFNGMKVTIRVHPLPSPP 385
           NWSSGKDFI L+K+QRYYFICG G CFNGMKVT+ VHPLP PP
Sbjct: 87  NWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTVLVHPLPPPP 129


>emb|CAN70727.1| hypothetical protein VITISV_028080 [Vitis vinifera]
          Length = 168

 Score =  199 bits (507), Expect = 3e-49
 Identities = 92/147 (62%), Positives = 107/147 (72%), Gaps = 6/147 (4%)
 Frame = +2

Query: 77  DHIVGANRGWNPGINYTLWSNNHTFYVGDFISFRYVKTQYNVFEVNKTGYDNCTLDGAVG 256
           DHIVGANRGWNPG+NYTLW+NNHTFYV D ISFRY K QYNVFEVN+TGYDNCT D A G
Sbjct: 22  DHIVGANRGWNPGMNYTLWANNHTFYVNDLISFRYQKNQYNVFEVNQTGYDNCTTDSATG 81

Query: 257 NWSSGKDFILLNKSQRYYFICGTGGCFNGMKVTIRVHPLPSPPXXXXXXXXXXXXXXXGK 436
           NWSSGKDFILL+K++RYYFICG GGCF+GMKV++ VHPLP+PP                 
Sbjct: 82  NWSSGKDFILLDKAKRYYFICGNGGCFSGMKVSVLVHPLPTPPSASTAAAEISKPNSAAA 141

Query: 437 ------SIFNISFMVLASFIWLGSGAI 499
                 S+  +  ++   +IWLGSG I
Sbjct: 142 RAPRSGSMAFVGLVLWIGWIWLGSGWI 168


>ref|XP_002332055.1| predicted protein [Populus trichocarpa] gi|118483612|gb|ABK93701.1|
           unknown [Populus trichocarpa]
           gi|222831941|gb|EEE70418.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  197 bits (502), Expect = 1e-48
 Identities = 96/147 (65%), Positives = 108/147 (73%), Gaps = 6/147 (4%)
 Frame = +2

Query: 77  DHIVGANRGWNPGINYTLWSNNHTFYVGDFISFRYVKTQYNVFEVNKTGYDNCTLDGAVG 256
           DHIVGAN+GWNPGINYT W+NNHTFYVGD ISFRY KTQYNVFEVN+TGYDNCT +GAVG
Sbjct: 26  DHIVGANKGWNPGINYTHWANNHTFYVGDLISFRYQKTQYNVFEVNQTGYDNCTTEGAVG 85

Query: 257 NWSSGKDFILLNKSQRYYFICGTGGCFNGMKVTIRVHPLPSPPXXXXXXXXXXXXXXXGK 436
           NW+SGKDFI LNK++RYYFI G G CFNGMKVTI VHPLP PP                 
Sbjct: 86  NWTSGKDFIPLNKAKRYYFIGGNGQCFNGMKVTILVHPLPPPPTSATMAANVKSSDSAAP 145

Query: 437 SIFN-----ISFMVLA-SFIWLGSGAI 499
            +F+     +  +VLA + IW GSG I
Sbjct: 146 LVFHKGLVGLRALVLAVASIWFGSGWI 172


Top