BLASTX nr result

ID: Atractylodes21_contig00025790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025790
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26264.3| unnamed protein product [Vitis vinifera]              342   5e-92
ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containi...   342   5e-92
ref|XP_002314694.1| predicted protein [Populus trichocarpa] gi|2...   332   6e-89
ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containi...   320   2e-85
ref|NP_193221.3| pentatricopeptide repeat-containing protein [Ar...   311   6e-83

>emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  342 bits (876), Expect = 5e-92
 Identities = 165/215 (76%), Positives = 188/215 (87%)
 Frame = -2

Query: 688 GHADMALSLFEEMKSGKLEVVPNYVTFVSVLAACSRAGAVKVGMGVFDSMRSRYGIEPGL 509
           G ADMA++LF+EM  G   V PNYVTFV VL+ACSRAG+V VGM +F+SMR RYGIEPG 
Sbjct: 289 GQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGA 348

Query: 508 EHYACVVDMLGRAGMVERAYEFIKRMPGRPTVSVWGALLGACKVHGHNELGKIAADNLFQ 329
           EHYACVVD+LGRAGMVE+AY+FIK+MP RPTVSVWGALLGA K+ G +ELGK+AADNLF+
Sbjct: 349 EHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFE 408

Query: 328 LDPQDSGNHVILSNMFAAAGRWEEANVVRMEMKDVGIKKGAGCSWISVKNSVHAFQAKDT 149
           LDP DSGNHV+LSNMFAAAGRWEEA +VR EMKDVGIKKGAGCSWI+  N+VH FQAKDT
Sbjct: 409 LDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDT 468

Query: 148 SHERNTDIQAMLAKLKTEMKAAGYTADTRLALFDL 44
           SHERN++IQAMLAKL+ EM+AAGY  DT  ALFDL
Sbjct: 469 SHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDL 503


>ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Vitis vinifera]
          Length = 684

 Score =  342 bits (876), Expect = 5e-92
 Identities = 165/215 (76%), Positives = 188/215 (87%)
 Frame = -2

Query: 688  GHADMALSLFEEMKSGKLEVVPNYVTFVSVLAACSRAGAVKVGMGVFDSMRSRYGIEPGL 509
            G ADMA++LF+EM  G   V PNYVTFV VL+ACSRAG+V VGM +F+SMR RYGIEPG 
Sbjct: 390  GQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGA 449

Query: 508  EHYACVVDMLGRAGMVERAYEFIKRMPGRPTVSVWGALLGACKVHGHNELGKIAADNLFQ 329
            EHYACVVD+LGRAGMVE+AY+FIK+MP RPTVSVWGALLGA K+ G +ELGK+AADNLF+
Sbjct: 450  EHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFE 509

Query: 328  LDPQDSGNHVILSNMFAAAGRWEEANVVRMEMKDVGIKKGAGCSWISVKNSVHAFQAKDT 149
            LDP DSGNHV+LSNMFAAAGRWEEA +VR EMKDVGIKKGAGCSWI+  N+VH FQAKDT
Sbjct: 510  LDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDT 569

Query: 148  SHERNTDIQAMLAKLKTEMKAAGYTADTRLALFDL 44
            SHERN++IQAMLAKL+ EM+AAGY  DT  ALFDL
Sbjct: 570  SHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDL 604


>ref|XP_002314694.1| predicted protein [Populus trichocarpa] gi|222863734|gb|EEF00865.1|
           predicted protein [Populus trichocarpa]
          Length = 631

 Score =  332 bits (850), Expect = 6e-89
 Identities = 158/215 (73%), Positives = 185/215 (86%)
 Frame = -2

Query: 688 GHADMALSLFEEMKSGKLEVVPNYVTFVSVLAACSRAGAVKVGMGVFDSMRSRYGIEPGL 509
           G  DMA++LFEEM+S   E V NYVT + VL+ACSR GAVK+G  +F+SMR RY IEPG 
Sbjct: 340 GDVDMAMTLFEEMQS---EAVANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGA 396

Query: 508 EHYACVVDMLGRAGMVERAYEFIKRMPGRPTVSVWGALLGACKVHGHNELGKIAADNLFQ 329
           EHYAC+ DMLGRAGMVERAYEF+++MP RPT+SVWGALL AC+V+G  ELGKIAADNLF+
Sbjct: 397 EHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFK 456

Query: 328 LDPQDSGNHVILSNMFAAAGRWEEANVVRMEMKDVGIKKGAGCSWISVKNSVHAFQAKDT 149
           LDP+DSGNHV+LSNMFAAAGRW+EA +VR EMKDVGIKKGAGCSW++ KN VH FQAKDT
Sbjct: 457 LDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDT 516

Query: 148 SHERNTDIQAMLAKLKTEMKAAGYTADTRLALFDL 44
           SHERN++IQAML KL+TEM+AAGY  DT  AL+DL
Sbjct: 517 SHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDL 551


>ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Glycine max]
          Length = 686

 Score =  320 bits (820), Expect = 2e-85
 Identities = 151/216 (69%), Positives = 181/216 (83%)
 Frame = -2

Query: 691  LGHADMALSLFEEMKSGKLEVVPNYVTFVSVLAACSRAGAVKVGMGVFDSMRSRYGIEPG 512
            LG  DMALSLF+EM SG   +  +YVT VSVL+ACSRAGAV+ G+ +F+SMR RYGIEPG
Sbjct: 391  LGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPG 450

Query: 511  LEHYACVVDMLGRAGMVERAYEFIKRMPGRPTVSVWGALLGACKVHGHNELGKIAADNLF 332
             EHYACVVD+LGR+G+V+RAYEFIKRMP  PT+SVWGALLGACK+HG  +LGKIAA+ LF
Sbjct: 451  AEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLF 510

Query: 331  QLDPQDSGNHVILSNMFAAAGRWEEANVVRMEMKDVGIKKGAGCSWISVKNSVHAFQAKD 152
            +LDP DSGNHV+ SNM A+AGRWEEA +VR EM+D+GIKK  G SW++VKN VH FQAKD
Sbjct: 511  ELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKD 570

Query: 151  TSHERNTDIQAMLAKLKTEMKAAGYTADTRLALFDL 44
            + HE+N++IQAMLAKL+ EMK AGY  D  L+LFDL
Sbjct: 571  SFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDL 606


>ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE 1
            gi|110735893|dbj|BAE99922.1| hypothetical protein
            [Arabidopsis thaliana] gi|332658109|gb|AEE83509.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 684

 Score =  311 bits (798), Expect = 6e-83
 Identities = 151/215 (70%), Positives = 178/215 (82%)
 Frame = -2

Query: 688  GHADMALSLFEEMKSGKLEVVPNYVTFVSVLAACSRAGAVKVGMGVFDSMRSRYGIEPGL 509
            G  DMAL+LFEEM        PNY+TFVS+L+ACSRAGAV+ GM +FDSMRS YGIEPG 
Sbjct: 390  GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGA 449

Query: 508  EHYACVVDMLGRAGMVERAYEFIKRMPGRPTVSVWGALLGACKVHGHNELGKIAADNLFQ 329
            EHY+C+VDMLGRAGMVERAYEFIK+MP +PT+SVWGAL  AC++HG  +LG +AA+NLF+
Sbjct: 450  EHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 509

Query: 328  LDPQDSGNHVILSNMFAAAGRWEEANVVRMEMKDVGIKKGAGCSWISVKNSVHAFQAKDT 149
            LDP+DSGNHV+LSN FAAAGRW EAN VR E+K VGIKKGAG SWI+VKN VHAFQAKD 
Sbjct: 510  LDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDR 569

Query: 148  SHERNTDIQAMLAKLKTEMKAAGYTADTRLALFDL 44
            SH  N +IQ  LAKL+ EM+AAGY  D +L+L+DL
Sbjct: 570  SHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDL 604


Top