BLASTX nr result

ID: Atractylodes21_contig00025761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025761
         (1278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251...   434   e-122
ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795...   410   e-114
ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis s...   410   e-114
ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]   404   e-113
ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|3...   394   e-110

>ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera]
            gi|297743697|emb|CBI36580.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  434 bits (1116), Expect(2) = e-122
 Identities = 219/330 (66%), Positives = 254/330 (76%), Gaps = 2/330 (0%)
 Frame = +3

Query: 27   QFHRLPQSTYVDALRFLPPLSAFDRYVVVASFNSDSDEASIDIHALNPSNPPILTLQXXX 206
            Q HRLPQS Y+DA+RFLP  S  DR+ V+A F++ S   S+ IH+L  S PP L LQ   
Sbjct: 13   QIHRLPQSQYIDAVRFLPAFSGLDRFAVLALFDTHSSSPSLQIHSLPKSTPPSLNLQSSL 72

Query: 207  XXXXXXXXLKVAQKSLQNPLIAASTYAGSFHILFPNPIDASFESEVSIPEKTLHLGPISC 386
                    L ++  S   PLIAAST++GS HIL  +  DAS +SE S+PEK+LH+G ISC
Sbjct: 73   SLSSRVSSLSLSL-SAHKPLIAASTFSGSLHILLLD-FDASVQSEFSVPEKSLHVGAISC 130

Query: 387  MDLQENGSACVSVGEDGRVNLISVGD-SGLDYRRVFDSKGLVSYTAARWASPTEFATGGL 563
            +DLQE+G  CVSVGEDGRVNL++ GD S L YRRV+DS GLVSYTAA+WASPTEFATGG 
Sbjct: 131  VDLQESGVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWASPTEFATGGF 190

Query: 564  GNSLQWWDQRRPGGPVSQFKGNWAQGAASGVVHSIDIHPSRKHTCLAGGSYGTVFAWDLR 743
            G  LQWWD R+PGGPVSQFKGNWAQ   SG+VHSIDIHPSRKHTCLAGGS GTVFAWDLR
Sbjct: 191  GFGLQWWDLRKPGGPVSQFKGNWAQRTTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLR 250

Query: 744  RQQQPIVLSGIDAGE-TTFSISESDVWEVQYDTFMSASNRANISSERVLPVMICSEDGIL 920
             QQQPI+LSG+   E  T S  ES+VWEV+YD +M  SN  N+SS R+LP M+CSEDGIL
Sbjct: 251  WQQQPIILSGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSRILPAMLCSEDGIL 310

Query: 921  AVIKQGEEPSELLAENCAINSFDIDRQNPS 1010
            AV++QGEEP ELLAE CAINSFDIDRQNPS
Sbjct: 311  AVVEQGEEPIELLAEPCAINSFDIDRQNPS 340



 Score = 30.8 bits (68), Expect(2) = e-122
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +1

Query: 1081 DVICSHEWETIAILTR 1128
            DVICS EWE+IAIL+R
Sbjct: 341  DVICSLEWESIAILSR 356


>ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
          Length = 346

 Score =  410 bits (1053), Expect(2) = e-114
 Identities = 214/326 (65%), Positives = 242/326 (74%), Gaps = 1/326 (0%)
 Frame = +3

Query: 36   RLPQSTYVDALRFLPPLSAFDRYVVVASFNSDSDEASIDIHALNPSNPPILTLQXXXXXX 215
            R PQ  YVDA+R+LP  SAFDR+ V+A F+ DSD +SI+IHALN  NP  L         
Sbjct: 10   RFPQHRYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHALN-QNPFSLEPHSSWSSP 68

Query: 216  XXXXXLKVAQKSLQNPLIAASTYAGSFHILFPNPIDASFESEVSIPEKTLHLGPISCMDL 395
                 LK +   LQ PLI AST +GS H LF +  DAS  SEVS+PE  LH  P SC+DL
Sbjct: 69   SRVSSLKPSH-FLQKPLIVASTSSGSLHFLFSDSSDASLLSEVSLPEGALHSLPASCVDL 127

Query: 396  QENGSACVSVGEDGRVNLISVGDSGLDYRRVFDSKGLVSYTAARWASPTEFATGGLGNSL 575
             + G  CVSVGEDG+VNL+ +GDS L+YRR+FDS GLVSYTA RWASP EFATGG G  L
Sbjct: 128  MDGGVECVSVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVRWASPMEFATGGFGFGL 187

Query: 576  QWWDQRRPGGPVSQFKGNWAQGAASGVVHSIDIHPSRKHTCLAGGSYGTVFAWDLRRQQQ 755
            QWWDQR+PGGPVSQFKGNW +   SG+VHSIDIHPSRKHTCLAGGS GTVFAWDLR QQQ
Sbjct: 188  QWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQQ 247

Query: 756  PIVLSGIDAGETTF-SISESDVWEVQYDTFMSASNRANISSERVLPVMICSEDGILAVIK 932
            PI+LSG  A  T   SISES+VWEVQYD  +    ++N SS R+LP MICSEDGIL VI+
Sbjct: 248  PIILSGAGAANTAVQSISESEVWEVQYDRCI----KSNTSSTRILPSMICSEDGILGVIE 303

Query: 933  QGEEPSELLAENCAINSFDIDRQNPS 1010
            QGEEP ELLAE CAINSFDIDR NPS
Sbjct: 304  QGEEPIELLAEPCAINSFDIDRHNPS 329



 Score = 31.6 bits (70), Expect(2) = e-114
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +1

Query: 1081 DVICSHEWETIAILTR 1128
            DVICS EWE +AILTR
Sbjct: 330  DVICSLEWEAVAILTR 345


>ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis sativus]
            gi|449511548|ref|XP_004163987.1| PREDICTED: nucleoporin
            Nup43-like [Cucumis sativus]
          Length = 350

 Score =  410 bits (1055), Expect(2) = e-114
 Identities = 202/333 (60%), Positives = 249/333 (74%), Gaps = 1/333 (0%)
 Frame = +3

Query: 15   QTLKQFHRLPQSTYVDALRFLPPLSAFDRYVVVASFNSDSDEASIDIHALNPSNPPILTL 194
            Q   Q HR PQ  YVD +R+LPPLSAF R+ V+A F+SDSD +SI+IH+L   NP  +  
Sbjct: 7    QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLT-QNPLDIVP 65

Query: 195  QXXXXXXXXXXXLKVAQKSLQNPLIAASTYAGSFHILFPNPIDASFESEVSIPEKTLHLG 374
                        LK +Q   +NPL+ ASTY GS H+L   P++AS +SE+S+PEK LH G
Sbjct: 66   HSTWISPSRVSSLKTSQLH-RNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKMLHDG 124

Query: 375  PISCMDLQENGSACVSVGEDGRVNLISVGDSGLDYRRVFDSKGLVSYTAARWASPTEFAT 554
            PISC+D+ + G  C++V EDGRV+L+SVG+SGL YRR+FDS GLVSY A +WASPTEF T
Sbjct: 125  PISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVT 184

Query: 555  GGLGNSLQWWDQRRPGGPVSQFKGNWAQGAASGVVHSIDIHPSRKHTCLAGGSYGTVFAW 734
            GG G SLQWWDQR+PGG VSQFK NW    ASG+VH IDIHPSRKHTCLAGGS+GTVFAW
Sbjct: 185  GGCGFSLQWWDQRKPGGAVSQFKANW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 735  DLRRQQQPIVLSGIDAGETTF-SISESDVWEVQYDTFMSASNRANISSERVLPVMICSED 911
            DLR QQQPI+LSG++  +T+  S  ES+VWEV YD ++ + N   +SS ++LP MICSED
Sbjct: 241  DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300

Query: 912  GILAVIKQGEEPSELLAENCAINSFDIDRQNPS 1010
            GIL  I+QG+EP ELLAE CAIN FDI+RQ+PS
Sbjct: 301  GILTSIEQGKEPVELLAEPCAINGFDINRQHPS 333



 Score = 27.7 bits (60), Expect(2) = e-114
 Identities = 10/16 (62%), Positives = 15/16 (93%)
 Frame = +1

Query: 1081 DVICSHEWETIAILTR 1128
            +VIC+ EWE++AIL+R
Sbjct: 334  EVICNLEWESVAILSR 349


>ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]
          Length = 347

 Score =  404 bits (1037), Expect(2) = e-113
 Identities = 212/329 (64%), Positives = 240/329 (72%), Gaps = 4/329 (1%)
 Frame = +3

Query: 36   RLPQSTYVDALRFLPPLSAFDRYVVVASFNSDSDEASIDIHALNPSNPPILTLQXXXXXX 215
            R PQ  YVDA+R+LP  SAFDR+ V+A F+ DSD +SI+IH+LNP NP  L         
Sbjct: 8    RFPQHKYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHSLNP-NPLSLEPHSSWSSP 66

Query: 216  XXXXXLKVAQKSLQNPLIAASTYAGSFHILFPNPIDASFESEVSIPEKTLHLGPISCMDL 395
                 LK A   LQ PLI AST +GS H LF +   A+ ESEVSIPE  LH  P SC+DL
Sbjct: 67   SRVSSLK-ASHFLQKPLIVASTSSGSLHFLFSDSSVATLESEVSIPEGALHSVPASCVDL 125

Query: 396  QENGSACVSVGEDGRVNLISVGDSGLDYRRVFDSKGLVSYTAARWASPTEFATGGLGNSL 575
             + G  CV+VGEDG+VNL+ +GDS L+YRR+FDS GLVSYTA  WASP EFATGG G  L
Sbjct: 126  LDGGVECVTVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVSWASPMEFATGGYGFGL 185

Query: 576  QWWDQRRPGGPVSQFKGNWAQGAASGVVHSIDIHPSRKHTCLAGGSYGTVFAWDLRRQQQ 755
             WWDQR+PGGPVSQFKGNW +   SG+VHSIDIHPSRKHTCLAGGS GTVFAWDLR QQQ
Sbjct: 186  HWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQQ 245

Query: 756  PIVLSGIDAG----ETTFSISESDVWEVQYDTFMSASNRANISSERVLPVMICSEDGILA 923
            PI+LSG  AG        SISES+VWEVQYD  +    + N SS R+LP MICSEDGIL 
Sbjct: 246  PIILSGAGAGAGGNTAVQSISESEVWEVQYDRCI----KPNTSSTRILPSMICSEDGILG 301

Query: 924  VIKQGEEPSELLAENCAINSFDIDRQNPS 1010
            VI+QGEEP ELLAE CAINSFDIDR NPS
Sbjct: 302  VIEQGEEPIELLAEPCAINSFDIDRHNPS 330



 Score = 31.6 bits (70), Expect(2) = e-113
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +1

Query: 1081 DVICSHEWETIAILTR 1128
            DVICS EWE +AILTR
Sbjct: 331  DVICSLEWEAVAILTR 346


>ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|355511317|gb|AES92459.1|
            Nucleoporin Nup43 [Medicago truncatula]
          Length = 351

 Score =  394 bits (1011), Expect(2) = e-110
 Identities = 201/339 (59%), Positives = 243/339 (71%), Gaps = 5/339 (1%)
 Frame = +3

Query: 6    MATQTLKQFHRLPQSTYVDALRFLPPLSAFDRYVVVASFNSDSDEASIDIHALNPSNPPI 185
            MA     + HR PQ  Y+DA+R+LP LSAF+R+ V+A+ + DS+ +SI+IH+  P NP  
Sbjct: 1    MAVTANSEIHRFPQYKYIDAVRWLPVLSAFNRFAVLATSDFDSNLSSIEIHSFKP-NPLS 59

Query: 186  LTLQXXXXXXXXXXXLKVAQKSLQNPLIAASTYAGSFHILFPNPIDASFESEVSIPEKTL 365
               Q           +K +Q  LQ  +IA+ST +GS H LF +  DA   SEVS+PE  L
Sbjct: 60   FEFQSSWTSPSPISSIKSSQ-FLQKSIIASSTSSGSLHFLFADSTDARLVSEVSVPENEL 118

Query: 366  HLGPISCMDLQENGSACVSVGEDGRVNLISVGDSGLDYRRVFDSKGLVSYTAARWASPTE 545
            HL    C+DL + G  CV+VG+DGR+NL++VGDS L+YRR+FDS GLVSYT+ +WASP E
Sbjct: 119  HLEGKCCIDLMDGGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASPVE 178

Query: 546  FATGGLGNSLQWWDQRRPGGPVSQFKGNWAQGAASGVVHSIDIHPSRKHTCLAGGSYGTV 725
            FATGG G  L WWDQR+PGGPVSQFKGNW +   SG+VHSIDIHPSRKHTCLA GS GTV
Sbjct: 179  FATGGYGFGLHWWDQRKPGGPVSQFKGNWDKNLNSGIVHSIDIHPSRKHTCLAAGSLGTV 238

Query: 726  FAWDLRRQQQPIVLSGIDAGE-----TTFSISESDVWEVQYDTFMSASNRANISSERVLP 890
             AWDLR QQQPI+LSG  AG+        SISES+VWEVQYD  +    ++N SS R+LP
Sbjct: 239  LAWDLRMQQQPIILSGTGAGDGAGNTAVQSISESEVWEVQYDRCI----KSNTSSTRILP 294

Query: 891  VMICSEDGILAVIKQGEEPSELLAENCAINSFDIDRQNP 1007
             MICSEDGIL VI+QGEEP ELLAE CAINSFDIDR NP
Sbjct: 295  AMICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNP 333



 Score = 32.0 bits (71), Expect(2) = e-110
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +1

Query: 1081 DVICSHEWETIAILTR 1128
            DVICS EWE++AILTR
Sbjct: 335  DVICSLEWESVAILTR 350


Top