BLASTX nr result

ID: Atractylodes21_contig00025609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025609
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514643.1| RNA binding protein, putative [Ricinus commu...    90   2e-16
emb|CBI27297.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002273995.1| PREDICTED: ras GTPase-activating protein-bin...    86   3e-15
ref|XP_002324119.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002512069.1| RNA binding protein, putative [Ricinus commu...    85   7e-15

>ref|XP_002514643.1| RNA binding protein, putative [Ricinus communis]
           gi|223546247|gb|EEF47749.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 464

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/104 (44%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
 Frame = -2

Query: 332 DQSILSSPAADGSMRSVTTKKGIQDEIIGSDIKNWAVNVHSVDSQDSIGESVIVGVTGFL 153
           D S+LS P ADG+M +VTT + I D+I+  + +++   V + D+Q+S  + VIV VTG L
Sbjct: 42  DSSLLSRPDADGTMTTVTTMQAINDKILSLNYEDYTAEVKNADAQESYEKGVIVLVTGCL 101

Query: 152 S-KDNVARHFSQTFLLAPQTVGFYVHNDLFQFIDKSDLSIPHDS 24
           + KDN+ + FSQTF LAPQ  G++V ND+F+F+ ++  S+P+++
Sbjct: 102 TGKDNIKKKFSQTFFLAPQDKGYFVLNDVFRFVGENG-SLPNNT 144


>emb|CBI27297.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
 Frame = -2

Query: 332 DQSILSSPAADGSMRSVTTKKGIQDEIIGSDIKNWAVNVHSVDSQDSIGESVIVGVTGFL 153
           D S+LS P  DG M +VTT +GI D I+  D K     + + D+Q S  + V+V VTG L
Sbjct: 42  DSSVLSRPGPDGVMTTVTTSEGINDMILSFDYKGHKAEILTADAQFSYKDGVVVLVTGCL 101

Query: 152 S-KDNVARHFSQTFLLAPQTVGFYVHNDLFQFIDKSD 45
           + KDNV R F+Q+F LAPQ  G++V ND+F+++D+ +
Sbjct: 102 TGKDNVRRKFTQSFFLAPQDNGYFVLNDVFRYMDERE 138


>ref|XP_002273995.1| PREDICTED: ras GTPase-activating protein-binding protein 1-like
           [Vitis vinifera]
          Length = 486

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
 Frame = -2

Query: 332 DQSILSSPAADGSMRSVTTKKGIQDEIIGSDIKNWAVNVHSVDSQDSIGESVIVGVTGFL 153
           D S+LS P  DG M +VTT +GI D I+  D K     + + D+Q S  + V+V VTG L
Sbjct: 42  DSSVLSRPGPDGVMTTVTTSEGINDMILSFDYKGHKAEILTADAQFSYKDGVVVLVTGCL 101

Query: 152 S-KDNVARHFSQTFLLAPQTVGFYVHNDLFQFIDKSD 45
           + KDNV R F+Q+F LAPQ  G++V ND+F+++D+ +
Sbjct: 102 TGKDNVRRKFTQSFFLAPQDNGYFVLNDVFRYMDERE 138


>ref|XP_002324119.1| predicted protein [Populus trichocarpa] gi|222867121|gb|EEF04252.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/97 (44%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
 Frame = -2

Query: 332 DQSILSSPAADGSMRSVTTKKGIQDEIIGSDIKNWAVNVHSVDSQDSIGESVIVGVTG-F 156
           D S+LS P A+G + SVTT +GI ++I+  D K+    + + D+Q S  + V V VTG F
Sbjct: 42  DSSVLSRPDANGVVTSVTTMQGINEKILSLDFKDCKAEIKTADAQISYKDGVTVLVTGCF 101

Query: 155 LSKDNVARHFSQTFLLAPQTVGFYVHNDLFQFIDKSD 45
             KDNV R F+Q+F LAPQ  G++V ND+F+++D ++
Sbjct: 102 TGKDNVKRKFAQSFFLAPQDSGYFVLNDVFRYVDDNE 138


>ref|XP_002512069.1| RNA binding protein, putative [Ricinus communis]
           gi|223549249|gb|EEF50738.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 493

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/99 (41%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
 Frame = -2

Query: 332 DQSILSSPAADGSMRSVTTKKGIQDEIIGSDIKNWAVNVHSVDSQDSIGESVIVGVTGFL 153
           + S++S P +DG M SV+T  GI   I+  D KN+ V + + D+Q+S G+ VIV VTGF 
Sbjct: 44  NSSVISRPDSDGLMSSVSTLDGIDKMILSVDYKNYVVEILTTDAQESFGDGVIVLVTGFF 103

Query: 152 S-KDNVARHFSQTFLLAPQTVGFYVHNDLFQFIDKSDLS 39
           + KDN+ R F+Q F L PQ   +YV ND+ +++ + +++
Sbjct: 104 TGKDNIRRKFAQVFFLEPQGHSYYVLNDVLRYVGEEEVA 142


Top