BLASTX nr result

ID: Atractylodes21_contig00025507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025507
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...    84   9e-14
emb|CBI36804.3| unnamed protein product [Vitis vinifera]               84   9e-14
ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arab...    81   6e-13
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...    75   3e-11
ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, par...    61   5e-07

>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score = 83.6 bits (205), Expect = 9e-14
 Identities = 41/70 (58%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = +1

Query: 976  IDECPPFFDGDYQEVKHTGSKV-DDSISCQDQAMGVPTHYHNDGSYLYMLTPAILPPSAD 1152
            +DE  PFF GD QE K   +K  +D  + Q+  MGVPTHY NDGS+LY+LTP   PPSAD
Sbjct: 149  LDEFIPFFVGDCQEEKKVWNKCYNDLNNHQEVGMGVPTHYQNDGSFLYLLTPVFSPPSAD 208

Query: 1153 VVNRWLLNDD 1182
             V+RWLL+DD
Sbjct: 209  CVHRWLLHDD 218


>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score = 83.6 bits (205), Expect = 9e-14
 Identities = 41/70 (58%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = +1

Query: 976  IDECPPFFDGDYQEVKHTGSKV-DDSISCQDQAMGVPTHYHNDGSYLYMLTPAILPPSAD 1152
            +DE  PFF GD QE K   +K  +D  + Q+  MGVPTHY NDGS+LY+LTP   PPSAD
Sbjct: 735  LDEFIPFFVGDCQEEKKVWNKCYNDLNNHQEVGMGVPTHYQNDGSFLYLLTPVFSPPSAD 794

Query: 1153 VVNRWLLNDD 1182
             V+RWLL+DD
Sbjct: 795  CVHRWLLHDD 804



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 33/88 (37%), Positives = 48/88 (54%)
 Frame = +1

Query: 1   KCSALAPDGNSSQLSSKKEIPQVDGSGDGEKLIHHTGKTSKTEKHSEREKSLKERVQLDS 180
           + S      +S Q S +K IPQVDGSGD       +G +S+TE  SE ++  + +V  D+
Sbjct: 500 RASCSTDHSHSPQTSLEKMIPQVDGSGDDPN--DCSGNSSETEMKSETKRFSQHQVLQDT 557

Query: 181 GSSLSRKHERKFPLWSPLPFCLSENMND 264
           G+S S KH+R   LW  LP   ++   D
Sbjct: 558 GASFSNKHKRNQSLWGSLPLTTTQKACD 585


>ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
            lyrata] gi|297334443|gb|EFH64861.1| hypothetical protein
            ARALYDRAFT_894489 [Arabidopsis lyrata subsp. lyrata]
          Length = 1899

 Score = 80.9 bits (198), Expect = 6e-13
 Identities = 104/428 (24%), Positives = 175/428 (40%), Gaps = 41/428 (9%)
 Frame = +1

Query: 19   PDGNSSQLSSKKEIPQVDGSGDGEKLIHHTGKTSKTEKHSEREKSLKERVQLDSGSSLSR 198
            PD  +   SS K+  + + + D   +      TS     +  ++  K  V  +   S S+
Sbjct: 528  PDSQNLITSSDKQSLETEVASDVPDI-----STSNGASENSFQRYRKSEVMENKNRSYSK 582

Query: 199  KHERKFPLWSPLPFCLSENM-NDVQPTDV--KVG----KSDSEIKTGTETCAAATDAGRC 357
             ++    +W PL F L++N+ ND   T+   K+G     SD  +   T+         + 
Sbjct: 583  SNKPSNSVWGPLLFTLTKNLQNDFDSTNTSDKLGLTKINSDHPMNETTDKYNVPVKEHQA 642

Query: 358  YDLMDDAEKGLSKVGSTIVGCSVRDLMRRKRYHRGETP---KVEFRHVKVTAEE----ES 516
             D+ +  +K +      + GCS+RDLMR+KR   G++P    ++FR V   + +    E 
Sbjct: 643  -DVCNSIDKNV------LAGCSLRDLMRKKRLCHGDSPVSQHMKFRKVLPQSRDSPHGEK 695

Query: 517  NNYTISSSKQR--------------NDEQDTTPPTNGDSEAVYVKDLNVEASAVRR---G 645
               T+ S  ++               D   T  P +  +    +     E  +V R    
Sbjct: 696  KQCTLRSEAEKQGPALSAEFSEVDYGDAPSTLSPIDDGTCECNISTQMTELHSVGRCSAK 755

Query: 646  QGGTQNL-PYITNFEKKKSALKMNHEDCHGKV---SNDILMIDGDD-QLPGAEKLLENNA 810
            +   QN    + NF     +L  + +         SN +L I+ DD Q  G E+    N 
Sbjct: 756  ETAFQNSDEVVRNFSFTTVSLGKDPQTVESGTLVSSNKLLGIEIDDVQKSGREQESTANE 815

Query: 811  AISSG--VPGTSAEDPQDIEI---STRTTLMQLDKEGDGVHGIDKKGDGVHGRDTVEDKD 975
             + +G  +  T ++ P  ++        +    D      H  +K+ DG  G      KD
Sbjct: 816  IVETGRLICLTLSKKPPSVDCLSSGLHDSGHSHDILAQFHHAREKQHDGCEG----NSKD 871

Query: 976  IDECPPFFDGDYQEVKHTGSKVDDSISCQDQAMGVPTHYHNDGSYLYMLTPAILPPSADV 1155
            I    PFF  +   +   G+K       Q  ++G+P H+ NDGS LY+L PA+ PPS D 
Sbjct: 872  I----PFFPLEDTGINKDGNK----HFFQGASLGIPLHHLNDGSNLYLLAPALSPPSVDS 923

Query: 1156 VNRWLLND 1179
            V +W+  D
Sbjct: 924  VLQWIAED 931


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
            gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
            subunit, putative [Ricinus communis]
          Length = 2066

 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
 Frame = +1

Query: 967  DKDIDECPPFFDGDYQEVKHTGSKVDDSISCQDQA---MGVPTHYHNDGSYLYMLTPAIL 1137
            +K + E  PFF+GD QE K   +K   + +  DQ    MGVPTHY NDGS LY+LTP   
Sbjct: 146  EKALGELLPFFEGDCQEKKVVQNKALPNTNSNDQQEAIMGVPTHYQNDGSLLYLLTPIYS 205

Query: 1138 PPSADVVNRWLL--NDDV 1185
            PPSAD V RWL   N+DV
Sbjct: 206  PPSADCVYRWLRCDNEDV 223


>ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus]
          Length = 1591

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 102/422 (24%), Positives = 169/422 (40%), Gaps = 34/422 (8%)
 Frame = +1

Query: 1    KCSALAPDGNSSQLSSKKEIPQVDGSGDGEKLIHHTGKTSKT---EKHSEREKSLKERVQ 171
            K      D +  + SS++ IPQ+DG+ D +      G T  T   + + E E+S K  + 
Sbjct: 567  KTKCCTDDEHFFRSSSEETIPQLDGAAD-DMFSSSGGSTENTPDRDLNVENERSSKLAIL 625

Query: 172  L---DSGSSLSRKHERKFPLWSPLPFCLSENMN-------DVQPTDVKVGKSDSEIKTGT 321
            L   DSGS  SRK E+ F  W  LPF  +E +N         +P        DSE  +  
Sbjct: 626  LHDIDSGSC-SRKKEKSF--WGSLPFHEAEKVNTDSRCVNSCRPGIYTSSTKDSEFVS-- 680

Query: 322  ETCAAATDAGRCYDLMDDAEKGL--SKVGSTIVGCSVRDLMRRKRYHRGETPKVEFRHVK 495
              C +  D G+    + +A+     S+ G   V  SVRDLMRRKR +R E     +    
Sbjct: 681  --CFSGEDGGQVDVTLQNADTSTYNSREGHLFVERSVRDLMRRKRNYRSEPLDCGY---- 734

Query: 496  VTAEEESNNYTISSSKQRNDEQDTTPPTNGDSEAVYVKDLNVEASAVRRGQGGTQNLPYI 675
                 ++NN+T+ S +++          + DSE +   + ++      R +  +  +P +
Sbjct: 735  ----GKANNFTVDSRQKK-----VVLSRDLDSEVLRSNEPSL------RYRDSSHLMPCL 779

Query: 676  TNFEKKKSALKMNHEDCHGKVSNDIL----MIDGDDQLPGAEKLLENNAAISSGVPGTS- 840
            TN    K+ + + +E+  G  ++ +     ++D  D L  A          S  V G S 
Sbjct: 780  TN---PKAIVNVFYENKPGYSNSSMYGKLPLVDVCDGLEQASSPNVGEIPGSETVSGPSQ 836

Query: 841  -AEDPQDIEISTRTTLMQLDKEGDGVHGIDKKGDGVHGRDTVEDKDIDECPPFFDGDY-- 1011
               DP   E  T   +  +  +G  +    K   G    D  +     +C    D DY  
Sbjct: 837  VCFDPCLSEAET-IGVGPVSLDGCEILASKKSNSGACNADAHDSTPSMQCA---DKDYFS 892

Query: 1012 -----------QEVKHTGSKVDDSISCQDQAMGVPTHYHNDGSYLYMLTPAILPPSADVV 1158
                       Q       K D  +    Q+M + T++  +      LT    PP+AD++
Sbjct: 893  PSTKRRLLLGNQNSNDRKQKDDAVLPALSQSMPMVTNFDGEQILSIGLTTCRKPPNADLM 952

Query: 1159 NR 1164
            ++
Sbjct: 953  HK 954


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