BLASTX nr result

ID: Atractylodes21_contig00025494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025494
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...    55   5e-06
ref|XP_002315233.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
 Frame = +1

Query: 1   KSLIQFRSVSKAWKAMIDSPRFIAAHSLRHTHPHHLLIYNNDKTFVSFVDDDTFPQQSSA 180
           KSL++FRS SK+WK++IDS  F + H  R       L   ++ T +  +D D +  Q++ 
Sbjct: 20  KSLLRFRSTSKSWKSLIDSQHFNSVHLSRS------LSLTSNTTLILRLDSDLY--QTNF 71

Query: 181 PTL--PSFFDP-----RDVVAIVGSSRGLFCIWDSSTSQVVLWNPSI 300
           PTL  P F +       + + ++GS  GL CI  +    +  WNPS+
Sbjct: 72  PTLDPPLFLNHPLMCYSNNITLLGSCNGLLCI-SNVADDIAFWNPSL 117


>ref|XP_002315233.1| predicted protein [Populus trichocarpa] gi|222864273|gb|EEF01404.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
 Frame = +1

Query: 1   KSLIQFRSVSKAWKAMIDSPRFIAAHSLRHTHPHHLLIYNNDKTFVSFVDDDTFPQQSSA 180
           K L++FRSVSK W ++I S  FI+ H L    P  LL +++++++   +D+++    S++
Sbjct: 22  KCLVRFRSVSKYWNSLITSAEFISIH-LAQAKP-LLLFHHHNQSYSLRLDNESLDMWSNS 79

Query: 181 P-TLPSFFDPRDVVAIVGSSRGLFCIWDSSTS---QVVLWNPSI 300
              LPS  +  D   I+GS  G+ C+ +S       ++LWNPSI
Sbjct: 80  EFELPSKREDDD-FQIIGSCNGVICLLNSPQDHGHSIILWNPSI 122


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