BLASTX nr result

ID: Atractylodes21_contig00025452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025452
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315635.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-42
gb|AAA34085.1| DNA-binding protein [Nicotiana tabacum]                176   2e-42
gb|AAB23811.1| Box II Factor, partial [Nicotiana tabacum] gi|404...   176   2e-42
prf||2103313A GT1a protein                                            176   2e-42
ref|XP_003633792.1| PREDICTED: trihelix transcription factor GT-...   174   9e-42

>ref|XP_002315635.1| predicted protein [Populus trichocarpa] gi|222864675|gb|EEF01806.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score =  176 bits (447), Expect = 1e-42
 Identities = 95/168 (56%), Positives = 116/168 (69%), Gaps = 15/168 (8%)
 Frame = -1

Query: 459 PHHHQT-------QMIVAAPGGGDATSSEENTIKXXXXXXXAPVKKRAETWVKEETRTLI 301
           PHH  T       QMI+     GD++  + + +K          KKRAETWV++ETR+LI
Sbjct: 38  PHHLPTTTNTNPHQMIL-----GDSSGDDNHEVKAP--------KKRAETWVQDETRSLI 84

Query: 300 MLRHEMDSLFNTSKSNKHLWDQISLKMREKGFDRSPTMCTDKWRNLLKEFKKAKQQENGV 121
            LR EMD LFNTSKSNKHLW+QIS KMREKGFDRSPTMCTDKWRNLLKEFKKAK ++ G 
Sbjct: 85  GLRREMDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHKDRG- 143

Query: 120 NHNGYSANSKMQFYKEVEEIIRDRNKN--------SKADSFMHFSDKG 1
                S ++KM +YKE++EI+R+RNKN        SK DS+M F+DKG
Sbjct: 144 -----SGSAKMSYYKEIDEILRERNKNPQYKSPIPSKVDSYMQFADKG 186


>gb|AAA34085.1| DNA-binding protein [Nicotiana tabacum]
          Length = 380

 Score =  176 bits (445), Expect = 2e-42
 Identities = 99/168 (58%), Positives = 115/168 (68%), Gaps = 14/168 (8%)
 Frame = -1

Query: 462 TPHHH---QTQMIVAAPGGGDATSS----EENTIKXXXXXXXAPVKKRAETWVKEETRTL 304
           TP+ H     Q+++    GGD TSS      N +K          KKRAETWV+EETR L
Sbjct: 31  TPNAHLQQPQQILLPGISGGDTTSSGGEDNNNNVKLAP-------KKRAETWVQEETRAL 83

Query: 303 IMLRHEMDSLFNTSKSNKHLWDQISLKMREKGFDRSPTMCTDKWRNLLKEFKKAK--QQE 130
           I LR E+DSLFNTSKSNKHLWDQISLKMREKGFDRSPTMCTDKWRNLLKEFKKAK  Q+ 
Sbjct: 84  ISLRRELDSLFNTSKSNKHLWDQISLKMREKGFDRSPTMCTDKWRNLLKEFKKAKHNQEP 143

Query: 129 NGVNHNGYSANSKMQFYKEVEEIIRDRNKN-----SKADSFMHFSDKG 1
           NG        ++KM ++KE+EEI++ RNKN      K D+FM FS KG
Sbjct: 144 NG--------SAKMSYHKEIEEILKARNKNYKNPTLKVDTFMQFSQKG 183


>gb|AAB23811.1| Box II Factor, partial [Nicotiana tabacum] gi|404085|gb|AAA34054.1|
           DNA-binding protein, partial [Nicotiana tabacum]
          Length = 392

 Score =  176 bits (445), Expect = 2e-42
 Identities = 99/168 (58%), Positives = 115/168 (68%), Gaps = 14/168 (8%)
 Frame = -1

Query: 462 TPHHH---QTQMIVAAPGGGDATSS----EENTIKXXXXXXXAPVKKRAETWVKEETRTL 304
           TP+ H     Q+++    GGD TSS      N +K          KKRAETWV+EETR L
Sbjct: 43  TPNAHLQQPQQILLPGISGGDTTSSGGEDNNNNVKLAP-------KKRAETWVQEETRAL 95

Query: 303 IMLRHEMDSLFNTSKSNKHLWDQISLKMREKGFDRSPTMCTDKWRNLLKEFKKAK--QQE 130
           I LR E+DSLFNTSKSNKHLWDQISLKMREKGFDRSPTMCTDKWRNLLKEFKKAK  Q+ 
Sbjct: 96  ISLRRELDSLFNTSKSNKHLWDQISLKMREKGFDRSPTMCTDKWRNLLKEFKKAKHNQEP 155

Query: 129 NGVNHNGYSANSKMQFYKEVEEIIRDRNKN-----SKADSFMHFSDKG 1
           NG        ++KM ++KE+EEI++ RNKN      K D+FM FS KG
Sbjct: 156 NG--------SAKMSYHKEIEEILKARNKNYKNPTLKVDTFMQFSQKG 195


>prf||2103313A GT1a protein
          Length = 380

 Score =  176 bits (445), Expect = 2e-42
 Identities = 99/168 (58%), Positives = 115/168 (68%), Gaps = 14/168 (8%)
 Frame = -1

Query: 462 TPHHH---QTQMIVAAPGGGDATSS----EENTIKXXXXXXXAPVKKRAETWVKEETRTL 304
           TP+ H     Q+++    GGD TSS      N +K          KKRAETWV+EETR L
Sbjct: 31  TPNAHLQQPQQILLPGISGGDTTSSGGEDNNNNVKLAP-------KKRAETWVQEETRAL 83

Query: 303 IMLRHEMDSLFNTSKSNKHLWDQISLKMREKGFDRSPTMCTDKWRNLLKEFKKAK--QQE 130
           I LR E+DSLFNTSKSNKHLWDQISLKMREKGFDRSPTMCTDKWRNLLKEFKKAK  Q+ 
Sbjct: 84  ISLRRELDSLFNTSKSNKHLWDQISLKMREKGFDRSPTMCTDKWRNLLKEFKKAKHNQEP 143

Query: 129 NGVNHNGYSANSKMQFYKEVEEIIRDRNKN-----SKADSFMHFSDKG 1
           NG        ++KM ++KE+EEI++ RNKN      K D+FM FS KG
Sbjct: 144 NG--------SAKMSYHKEIEEILKARNKNYKNPTLKVDTFMQFSQKG 183


>ref|XP_003633792.1| PREDICTED: trihelix transcription factor GT-1 isoform 2 [Vitis
           vinifera]
          Length = 334

 Score =  174 bits (440), Expect = 9e-42
 Identities = 93/162 (57%), Positives = 112/162 (69%), Gaps = 8/162 (4%)
 Frame = -1

Query: 462 TPHHHQTQMIVAAPGGGDATSSEENTIKXXXXXXXAPVKKRAETWVKEETRTLIMLRHEM 283
           +P   Q QMI+A   G      E++ +K          KKRAETWV+EETR LI  R E+
Sbjct: 32  SPQQQQQQMILAESSG------EDHEMKAP--------KKRAETWVQEETRNLISFRREV 77

Query: 282 DSLFNTSKSNKHLWDQISLKMREKGFDRSPTMCTDKWRNLLKEFKKAKQQENGVNHNGYS 103
           D LFNTSKSNKHLW+QIS KMREKGFDRSPTMCTDKWRNLLKEFKKAK Q+     +  S
Sbjct: 78  DGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQD----RSSSS 133

Query: 102 ANSKMQFYKEVEEIIRDRNKN--------SKADSFMHFSDKG 1
            ++KM +YKE+EE++RDR+KN        SK DS++ FSDKG
Sbjct: 134 GSAKMAYYKELEELLRDRSKNGSYKSPTPSKVDSYIQFSDKG 175


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