BLASTX nr result

ID: Atractylodes21_contig00025219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025219
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN398...   102   4e-20
ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vin...   101   7e-20
ref|XP_002513523.1| polyadenylate-binding protein, putative [Ric...   100   1e-19
ref|NP_001236162.1| uncharacterized protein LOC100527187 [Glycin...   100   2e-19
ref|XP_002299789.1| predicted protein [Populus trichocarpa] gi|1...   100   2e-19

>gb|ABK25331.1| unknown [Picea sitchensis] gi|224284327|gb|ACN39899.1| unknown
           [Picea sitchensis]
          Length = 205

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/78 (69%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
 Frame = -1

Query: 228 TPIPKLKXXXXXXXXXXXSV-PKKTKGRGFREETDAARTNRMSGR-FDSLDSDGGPGPER 55
           TP PKLK              PKKTKGRGFREETDA R +R + R F+SLDSDGGPGP+R
Sbjct: 35  TPAPKLKSTITGGTSQLGDGGPKKTKGRGFREETDAERNSRFAAREFESLDSDGGPGPQR 94

Query: 54  SIEGWIILVTGVHEEAQE 1
           SIEGWIILVTGVHEEAQE
Sbjct: 95  SIEGWIILVTGVHEEAQE 112


>ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera]
           gi|296088561|emb|CBI37552.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/77 (67%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
 Frame = -1

Query: 225 PIPKLKXXXXXXXXXXXSV-PKKTKGRGFREETDAARTNRMSGR-FDSLDSDGGPGPERS 52
           P+PKLK           +  PKKTKGRGFR++TDA R +R + R FDSLDSDGGPGP+RS
Sbjct: 35  PLPKLKSAITGGAPSSLAAAPKKTKGRGFRDDTDADRNSRFAARDFDSLDSDGGPGPQRS 94

Query: 51  IEGWIILVTGVHEEAQE 1
           IEGWIILVTGVHEEAQE
Sbjct: 95  IEGWIILVTGVHEEAQE 111


>ref|XP_002513523.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223547431|gb|EEF48926.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 199

 Score =  100 bits (250), Expect = 1e-19
 Identities = 51/77 (66%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
 Frame = -1

Query: 225 PIPKLKXXXXXXXXXXXSVPKKTKGRGFREETDAARTNRMSGR--FDSLDSDGGPGPERS 52
           P+PKLK           S P+KTKGRGFREE DA R  R++ R  FDSL +DGGPGP+RS
Sbjct: 34  PLPKLKSAITGGAASSLSAPRKTKGRGFREEADADRQTRLASRGDFDSLGTDGGPGPQRS 93

Query: 51  IEGWIILVTGVHEEAQE 1
           IEGWIILVTGVHEEAQE
Sbjct: 94  IEGWIILVTGVHEEAQE 110


>ref|NP_001236162.1| uncharacterized protein LOC100527187 [Glycine max]
           gi|255631742|gb|ACU16238.1| unknown [Glycine max]
          Length = 204

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/76 (67%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
 Frame = -1

Query: 225 PIPKLKXXXXXXXXXXXSVPKKTKGRGFREETDAARTNRMSGR-FDSLDSDGGPGPERSI 49
           P PKLK           S PKKTKGRGFR++TDA R  R+SG  FDSL ++GGPGP+RSI
Sbjct: 36  PQPKLKSAITPAATSSLSAPKKTKGRGFRQDTDANRNTRLSGTDFDSLTAEGGPGPQRSI 95

Query: 48  EGWIILVTGVHEEAQE 1
           EGWIILVTGVHEEAQE
Sbjct: 96  EGWIILVTGVHEEAQE 111


>ref|XP_002299789.1| predicted protein [Populus trichocarpa] gi|118484267|gb|ABK94013.1|
           unknown [Populus trichocarpa]
           gi|222847047|gb|EEE84594.1| predicted protein [Populus
           trichocarpa]
          Length = 205

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/77 (66%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
 Frame = -1

Query: 225 PIPKLKXXXXXXXXXXXS-VPKKTKGRGFREETDAARTNRMSGR-FDSLDSDGGPGPERS 52
           P+PKLK              PKKTKGRGFREE DA R +R+SGR FDSL SDGGPGP+RS
Sbjct: 36  PLPKLKSAITGGSASSSLSAPKKTKGRGFREEVDAERQSRLSGRGFDSLGSDGGPGPQRS 95

Query: 51  IEGWIILVTGVHEEAQE 1
           +EGWIILV+GVHEEAQ+
Sbjct: 96  VEGWIILVSGVHEEAQD 112


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