BLASTX nr result

ID: Atractylodes21_contig00025193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025193
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150203.1| PREDICTED: CCR4-NOT transcription complex su...    93   3e-17
emb|CBI28248.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex su...    89   5e-16
emb|CAN83603.1| hypothetical protein VITISV_020807 [Vitis vinifera]    89   5e-16
ref|XP_003542639.1| PREDICTED: CCR4-NOT transcription complex su...    88   6e-16

>ref|XP_004150203.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Cucumis
           sativus]
          Length = 853

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/79 (55%), Positives = 59/79 (74%)
 Frame = -2

Query: 237 GDASLSPDADLISVTQTLAKEAYVLFQLGKYVDCLKVLNQILEKKADDPKILHNIAIVES 58
           G +S   D   +S+T  LA+EA  LFQ GKYV C++VLNQ+L+KK DDPK+LHNIAI E 
Sbjct: 16  GSSSAVEDDGALSITAALAREAASLFQSGKYVGCVEVLNQLLQKKEDDPKVLHNIAIAEY 75

Query: 57  FQDGFSHPKRFLEALDSLK 1
            +DG S+PK+ LE L+++K
Sbjct: 76  LRDGCSNPKKLLEVLNNVK 94


>emb|CBI28248.3| unnamed protein product [Vitis vinifera]
          Length = 812

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/75 (58%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
 Frame = -2

Query: 222 SPDADL-ISVTQTLAKEAYVLFQLGKYVDCLKVLNQILEKKADDPKILHNIAIVESFQDG 46
           SPD D  +SV  +LAK+A +LFQ  K+ +CL VLNQ+L+KK DDPK+LHNIAI E F+DG
Sbjct: 18  SPDDDAGLSVAASLAKDAALLFQSRKFSECLDVLNQLLQKKEDDPKVLHNIAIAEYFRDG 77

Query: 45  FSHPKRFLEALDSLK 1
            S PK+ LE L+++K
Sbjct: 78  CSDPKKLLEVLNNVK 92


>ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Vitis
           vinifera]
          Length = 857

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/75 (58%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
 Frame = -2

Query: 222 SPDADL-ISVTQTLAKEAYVLFQLGKYVDCLKVLNQILEKKADDPKILHNIAIVESFQDG 46
           SPD D  +SV  +LAK+A +LFQ  K+ +CL VLNQ+L+KK DDPK+LHNIAI E F+DG
Sbjct: 18  SPDDDAGLSVAASLAKDAALLFQSRKFSECLDVLNQLLQKKEDDPKVLHNIAIAEYFRDG 77

Query: 45  FSHPKRFLEALDSLK 1
            S PK+ LE L+++K
Sbjct: 78  CSDPKKLLEVLNNVK 92


>emb|CAN83603.1| hypothetical protein VITISV_020807 [Vitis vinifera]
          Length = 154

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/75 (58%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
 Frame = -2

Query: 222 SPDADL-ISVTQTLAKEAYVLFQLGKYVDCLKVLNQILEKKADDPKILHNIAIVESFQDG 46
           SPD D  +SV  +LAK+A +LFQ  K+ +CL VLNQ+L+KK DDPK+LHNIAI E F+DG
Sbjct: 18  SPDDDAGLSVAASLAKDAALLFQSRKFSECLDVLNQLLQKKEDDPKVLHNIAIAEYFRDG 77

Query: 45  FSHPKRFLEALDSLK 1
            S PK+ LE L+++K
Sbjct: 78  CSDPKKLLEVLNNVK 92


>ref|XP_003542639.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Glycine
           max]
          Length = 859

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/80 (52%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
 Frame = -2

Query: 234 DASLSPDAD--LISVTQTLAKEAYVLFQLGKYVDCLKVLNQILEKKADDPKILHNIAIVE 61
           DAS + DA+  + +V   LAK+A + FQ GK+ +C++VLNQ+L+KK DDPK+LHNIAI E
Sbjct: 18  DASFATDAEDGVFTVVVALAKDAALHFQSGKFAECVEVLNQLLQKKQDDPKVLHNIAIAE 77

Query: 60  SFQDGFSHPKRFLEALDSLK 1
            F+DG S PK+ LE ++ +K
Sbjct: 78  FFRDGCSDPKKLLEVINGIK 97


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