BLASTX nr result

ID: Atractylodes21_contig00025187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025187
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]               202   5e-50
emb|CCI55364.1| PH01B035L11.9 [Phyllostachys edulis]                   84   4e-14
emb|CAN65233.1| hypothetical protein VITISV_022975 [Vitis vinifera]    81   2e-13
gb|ABA26965.1| TO22-2 [Taraxacum officinale]                           80   6e-13
ref|NP_001173078.1| Os02g0616666 [Oryza sativa Japonica Group] g...    79   1e-12

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score =  202 bits (515), Expect = 5e-50
 Identities = 125/268 (46%), Positives = 150/268 (55%), Gaps = 9/268 (3%)
 Frame = +2

Query: 2   ESVVSELLADETRLKTQECKGILPTPTPNPSVLVVSQKPFASQ*NRFRTRVGIDECNFCK 181
           +SVVSELLA+E RL++   KGIL     NPSVL V  KPF++  N+  TRVG DEC+FCK
Sbjct: 192 DSVVSELLAEEIRLQSYSEKGILSAS--NPSVLAVPSKPFSNHQNKPYTRVGFDECSFCK 249

Query: 182 EKGHWKSQCPKLM--------GNPPKNLYRHSFGGLPPPQFGNQRVRXXXXXXXXXXXXX 337
           +KGHWK+QCPKL         G+  ++    S  G  PP      V              
Sbjct: 250 QKGHWKAQCPKLRQQNQAWKSGSQSQSNAHRSPQGYKPPHHNTAAV-------------- 295

Query: 338 XFESSDFGMASSNVALATLTEQFQNFLNTQXXXXXXXXXXXXXXXXXXGMPLSTWILDSG 517
              +S   +   N    TL EQFQ FL+ Q                  G+  S W+LDSG
Sbjct: 296 ---ASPGSITDPN----TLAEQFQKFLSLQPQAMSASSIGQLPHSSS-GISHSEWVLDSG 347

Query: 518 ASFHMSQHSKSFVSLKPIPSVPVMTADGTPMPLAGIGYVVDSRFSLSNVYHIPKLYLNIV 697
           AS HMS  S SF S+ P+ S+PVMTADGTPMPLAG+G VV    SL NVY IPKL LN+ 
Sbjct: 348 ASHHMSPDSSSFTSVSPLSSIPVMTADGTPMPLAGVGSVVTLHLSLPNVYLIPKLKLNLA 407

Query: 698 SVGQLCDFG-YLVSFSSESCHVQDPHSQ 778
           S+GQ+CD G YLV FS   C VQD  SQ
Sbjct: 408 SIGQICDSGDYLVMFSGSFCCVQDLQSQ 435


>emb|CCI55364.1| PH01B035L11.9 [Phyllostachys edulis]
          Length = 697

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 41/95 (43%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
 Frame = +2

Query: 494 STWILDSGASFHMSQHSKSFVSLKPIPS-VPVMTADGTPMPLAGIGYVVDSRFSLSNVYH 670
           S WILDSGASFHM+ +S +   + P+ S V V+TADGT + ++G G + +S F + +V +
Sbjct: 290 SPWILDSGASFHMTSYSSTLSFITPLDSPVSVLTADGTSLSVSGRGPLSNSSFHVPSVAY 349

Query: 671 IPKLYLNIVSVGQLCDFGYLVSFSSESCHVQDPHS 775
           +P+L + ++S GQ+ D G  V  +S+SC VQ+ H+
Sbjct: 350 VPRLTMQLLSAGQITDLGCRVILNSDSCCVQNRHT 384


>emb|CAN65233.1| hypothetical protein VITISV_022975 [Vitis vinifera]
          Length = 1277

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 70/265 (26%), Positives = 104/265 (39%), Gaps = 7/265 (2%)
 Frame = +2

Query: 2   ESVVSELLADETRLKTQECKGILPTPTPNPSVLVVSQKP----FASQ*NRFRTRVGIDEC 169
           ++ V+EL+  E RL T + +  L      PS  ++ Q      F+   NR R +     C
Sbjct: 301 DTAVNELVRXEARLATLQAQNKLNILAITPSTPLIEQPQQLGDFSGSSNR-RKQTNKKFC 359

Query: 170 NFCKEKGHWKSQCPKLMGNPPKNLYRHSFGGLPPPQFGNQRVRXXXXXXXXXXXXXXFES 349
           N+CK  GH    C +      K+    +     PP     +                   
Sbjct: 360 NYCKRPGHTIETCYRXN----KSTXAVANTAPTPPTVSTSQSSGSTINLSSIELQEIIAQ 415

Query: 350 SD--FGMASSNVALATLTEQFQNFLNTQXXXXXXXXXXXXXXXXXXGMPLSTWILDSGAS 523
           +    G AS + AL+ L  + Q                             TW+ DS   
Sbjct: 416 AVRMVGNASLSTALSVLPGKSQ-----------------------------TWLFDSACC 446

Query: 524 FHMSQHSKSFVSLKPIPS-VPVMTADGTPMPLAGIGYVVDSRFSLSNVYHIPKLYLNIVS 700
            HM+ HS  F +L P P  + +  ADG+ M    +G+V  S  S+  V+H+P L  N+ S
Sbjct: 447 NHMTPHSSLFTNLDPAPHPLNIHIADGSTMHGNSLGFVSTSTLSIXGVFHVPDLSYNLCS 506

Query: 701 VGQLCDFGYLVSFSSESCHVQDPHS 775
           VGQL + GY + F    C VQDP +
Sbjct: 507 VGQLAELGYRLIFYYSGCIVQDPRT 531


>gb|ABA26965.1| TO22-2 [Taraxacum officinale]
          Length = 99

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 39/73 (53%), Positives = 49/73 (67%)
 Frame = +2

Query: 482 GMPLSTWILDSGASFHMSQHSKSFVSLKPIPSVPVMTADGTPMPLAGIGYVVDSRFSLSN 661
           G+P S WILDSGAS HMS H  SF SL P   V V++A  TPM + G+G +V    SL++
Sbjct: 27  GIPSSLWILDSGASHHMSPHMSSFSSLSPRAPVSVLSASATPMSVEGVGSIVTPYISLTD 86

Query: 662 VYHIPKLYLNIVS 700
           VY+IP L LN+ S
Sbjct: 87  VYYIPTLALNLAS 99


>ref|NP_001173078.1| Os02g0616666 [Oryza sativa Japonica Group]
           gi|255671092|dbj|BAH91807.1| Os02g0616666 [Oryza sativa
           Japonica Group]
          Length = 1228

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
 Frame = +2

Query: 491 LSTWILDSGASFHMSQHSKSFVSLKPIPSVP--VMTADGTPMPLAGIGYVVDSRFSLSNV 664
           LS+W LDSGASFHM+  S    S+ P P  P  V TA+GT +P+   G +  S F +  V
Sbjct: 235 LSSWFLDSGASFHMTPDSTHLSSMSP-PDTPLTVQTANGTSLPVVDRGTLSTSSFRVPTV 293

Query: 665 YHIPKLYLNIVSVGQLCDFGYLVSFSSESCHVQD 766
            H+PKL + ++S GQ+ D G  +   ++SC VQD
Sbjct: 294 SHVPKLTMQLMSAGQITDHGCRIILEADSCCVQD 327


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