BLASTX nr result

ID: Atractylodes21_contig00025178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025178
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30066.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-li...   114   1e-23
emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]   114   1e-23
ref|XP_002308002.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_003589939.1| Peptide chain release factor [Medicago trunc...    99   5e-19

>emb|CBI30066.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/118 (50%), Positives = 72/118 (61%)
 Frame = -2

Query: 476 DQGRKGPIVQIQHSPTGLMVQSSGERNQFSXXXXXXXXXXXXXXXXXKDQRLPSVNQIKN 297
           +QGR G  V IQH PTG+ VQSSGER+ F+                  +Q +P V  IK 
Sbjct: 295 EQGRTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKR 354

Query: 296 DAIVDMWHQETRRYVFRPYKLVQDVKTGIQLADPYFVLNGNLDPFFSAHINNRHVCDM 123
           +AI DMW QETRRYVF P KLVQDVKT IQL D   VL+GN++P   A+I+ R   DM
Sbjct: 355 EAIADMWKQETRRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQASDM 412


>ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 417

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/118 (50%), Positives = 72/118 (61%)
 Frame = -2

Query: 476 DQGRKGPIVQIQHSPTGLMVQSSGERNQFSXXXXXXXXXXXXXXXXXKDQRLPSVNQIKN 297
           +QGR G  V IQH PTG+ VQSSGER+ F+                  +Q +P V  IK 
Sbjct: 298 EQGRTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKR 357

Query: 296 DAIVDMWHQETRRYVFRPYKLVQDVKTGIQLADPYFVLNGNLDPFFSAHINNRHVCDM 123
           +AI DMW QETRRYVF P KLVQDVKT IQL D   VL+GN++P   A+I+ R   DM
Sbjct: 358 EAIADMWKQETRRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQASDM 415


>emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]
          Length = 450

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/118 (50%), Positives = 72/118 (61%)
 Frame = -2

Query: 476 DQGRKGPIVQIQHSPTGLMVQSSGERNQFSXXXXXXXXXXXXXXXXXKDQRLPSVNQIKN 297
           +QGR G  V IQH PTG+ VQSSGER+ F+                  +Q +P V  IK 
Sbjct: 331 EQGRTGHAVCIQHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKR 390

Query: 296 DAIVDMWHQETRRYVFRPYKLVQDVKTGIQLADPYFVLNGNLDPFFSAHINNRHVCDM 123
           +AI DMW QETRRYVF P KLVQDVKT IQL D   VL+GN++P   A+I+ R   DM
Sbjct: 391 EAIADMWKQETRRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQASDM 448


>ref|XP_002308002.1| predicted protein [Populus trichocarpa] gi|222853978|gb|EEE91525.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/119 (44%), Positives = 72/119 (60%)
 Frame = -2

Query: 491 SLCEDDQGRKGPIVQIQHSPTGLMVQSSGERNQFSXXXXXXXXXXXXXXXXXKDQRLPSV 312
           SL  D + R    V +QH PTG+ VQSSGER+ F+                 ++Q++  V
Sbjct: 254 SLLRDRKSRTELTVCLQHIPTGISVQSSGERSHFANKVKAHNRLKAKLLVIAEEQKVCDV 313

Query: 311 NQIKNDAIVDMWHQETRRYVFRPYKLVQDVKTGIQLADPYFVLNGNLDPFFSAHINNRH 135
           + I+   IVD W +ETRRYV +PYKLVQDV+TGI+L D   +L+GN++    AHIN RH
Sbjct: 314 SSIRRADIVDEWQKETRRYVSQPYKLVQDVRTGIELPDLNSILDGNINTLIGAHINIRH 372


>ref|XP_003589939.1| Peptide chain release factor [Medicago truncatula]
           gi|355478987|gb|AES60190.1| Peptide chain release factor
           [Medicago truncatula]
          Length = 538

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/106 (47%), Positives = 66/106 (62%)
 Frame = -2

Query: 455 IVQIQHSPTGLMVQSSGERNQFSXXXXXXXXXXXXXXXXXKDQRLPSVNQIKNDAIVDMW 276
           IV I H PTG+ VQSSGER+QF+                  +Q + S+N I  D IV++W
Sbjct: 432 IVCIHHIPTGITVQSSGERSQFANKMKALNRLKAKLQVIAIEQGVGSINGIVKDKIVNLW 491

Query: 275 HQETRRYVFRPYKLVQDVKTGIQLADPYFVLNGNLDPFFSAHINNR 138
            ++TRRYV  PYKLV DVKT I+++D   VL+GN+ P  +AHIN R
Sbjct: 492 EEKTRRYVSHPYKLVHDVKTDIEMSDLNSVLDGNIGPLIAAHINTR 537


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