BLASTX nr result

ID: Atractylodes21_contig00025135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025135
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267566.1| PREDICTED: guanine nucleotide-binding protei...    56   9e-16
emb|CAN64618.1| hypothetical protein VITISV_001358 [Vitis vinifera]    56   9e-16
ref|NP_001234382.1| nuclear GTPase-like [Solanum lycopersicum] g...    51   4e-13
ref|XP_003555699.1| PREDICTED: guanine nucleotide-binding protei...    50   3e-12
ref|XP_002521110.1| GTP-binding protein-plant, putative [Ricinus...    50   1e-11

>ref|XP_002267566.1| PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Vitis
           vinifera] gi|297744311|emb|CBI37281.3| unnamed protein
           product [Vitis vinifera]
          Length = 596

 Score = 56.2 bits (134), Expect(2) = 9e-16
 Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = -3

Query: 442 EDEAM-VENDDSGEAKIKXXXXSRQNEKLYAAEGVLNTXXXXXXXXXXXXXXXXASMEED 266
           +DE+M VE D +G+ K K     RQNEKLYAAEG+LN                  +ME+D
Sbjct: 505 DDESMGVEEDAAGKTKAKTAGS-RQNEKLYAAEGILNPKIKRAEKKKRKKANKTTAMEDD 563

Query: 265 RSMEGDFDLKMDDVKRGSTMDVGE-EDNDGSVN 170
                D+D K+D  K+GSTM+  E  D DG  +
Sbjct: 564 -----DYDFKVDYNKKGSTMEDSEGSDTDGEAS 591



 Score = 52.8 bits (125), Expect(2) = 9e-16
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = -1

Query: 645 DSSIIGSLKSVDDFNSVTITPNNPLVFDETMIETDKQSQ 529
           +SS IGSLKSVDDF+ V + PN+PL FDE M+E D Q Q
Sbjct: 450 ESSFIGSLKSVDDFHPVELPPNSPLSFDEKMLEGDVQPQ 488


>emb|CAN64618.1| hypothetical protein VITISV_001358 [Vitis vinifera]
          Length = 593

 Score = 56.2 bits (134), Expect(2) = 9e-16
 Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = -3

Query: 442 EDEAM-VENDDSGEAKIKXXXXSRQNEKLYAAEGVLNTXXXXXXXXXXXXXXXXASMEED 266
           +DE+M VE D +G+ K K     RQNEKLYAAEG+LN                  +ME+D
Sbjct: 500 DDESMGVEEDAAGKTKAKTAGS-RQNEKLYAAEGILNPKIKRAEKKKRKKANKTTAMEDD 558

Query: 265 RSMEGDFDLKMDDVKRGSTMDVGE-EDNDGSVN 170
                D+D K+D  K+GSTM+  E  D DG  +
Sbjct: 559 -----DYDFKVDYNKKGSTMEDSEGSDTDGEAS 586



 Score = 52.8 bits (125), Expect(2) = 9e-16
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = -1

Query: 645 DSSIIGSLKSVDDFNSVTITPNNPLVFDETMIETDKQSQ 529
           +SS IGSLKSVDDF+ V + PN+PL FDE M+E D Q Q
Sbjct: 445 ESSFIGSLKSVDDFHPVELPPNSPLSFDEKMLEGDVQPQ 483


>ref|NP_001234382.1| nuclear GTPase-like [Solanum lycopersicum]
           gi|83630757|gb|ABC26876.1| putative nuclear GTPase
           [Solanum lycopersicum]
          Length = 609

 Score = 51.2 bits (121), Expect(2) = 4e-13
 Identities = 34/100 (34%), Positives = 47/100 (47%)
 Frame = -3

Query: 439 DEAMVENDDSGEAKIKXXXXSRQNEKLYAAEGVLNTXXXXXXXXXXXXXXXXASMEEDRS 260
           DE M   +  G         SRQNEKLY  EG+LNT                 +++    
Sbjct: 508 DEPMDSGEGDGAQTRGKSASSRQNEKLYGEEGMLNTKQKKAEKKRRKKDKPSTAID---- 563

Query: 259 MEGDFDLKMDDVKRGSTMDVGEEDNDGSVNEVTKNRFALP 140
           M+GD+D K+D +K+ S MD  + D   + +E   NRF LP
Sbjct: 564 MDGDYDFKVDYIKKDSAMD--DADEVVATDESKNNRFELP 601



 Score = 48.9 bits (115), Expect(2) = 4e-13
 Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
 Frame = -1

Query: 645 DSSIIGSLKSVDDFNSVTITPNNPLVFDETMIETDKQ---SQHGNPVGNISNE 496
           +SSIIGSLKSV+DFN V +  N P++FD+ M+E + Q   ++  N   N+ +E
Sbjct: 453 ESSIIGSLKSVNDFNPVEVPSNRPVIFDDNMLEDNLQQPLAESDNATENLVSE 505


>ref|XP_003555699.1| PREDICTED: guanine nucleotide-binding protein-like 3 homolog
           [Glycine max]
          Length = 574

 Score = 49.7 bits (117), Expect(2) = 3e-12
 Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
 Frame = -3

Query: 439 DEAMVENDDSGEAKIKXXXXSRQNEKLYAAEGVLNTXXXXXXXXXXXXXXXXASMEEDRS 260
           DE+M   DD+G+ K       RQNEKLYA +G+LNT                 +  +   
Sbjct: 480 DESM--EDDAGKNK-GNSEAGRQNEKLYATDGMLNTKMRRAEKKKRKKAKKAVASSDP-- 534

Query: 259 MEGDFDLKMDDVKRGSTMDVGE---EDNDGSV-NEVTKN 155
           M+GD+D K+D  ++G+TMD  E   ED+D  V +EV  N
Sbjct: 535 MDGDYDFKVDYFQKGATMDAEESKSEDDDEQVSSEVPMN 573



 Score = 47.4 bits (111), Expect(2) = 3e-12
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
 Frame = -1

Query: 645 DSSIIGSLKSVDDFNSVTITPNNPLVFDETMIETD---KQSQHGNPVGNIS 502
           +SS IGSLKSVDD N+V +  + PL  DETM+E +   K ++ G   GN++
Sbjct: 427 ESSYIGSLKSVDDLNAVEVPSSRPLNLDETMLEDETQIKPAEQGEGPGNLA 477


>ref|XP_002521110.1| GTP-binding protein-plant, putative [Ricinus communis]
           gi|223539679|gb|EEF41261.1| GTP-binding protein-plant,
           putative [Ricinus communis]
          Length = 599

 Score = 50.1 bits (118), Expect(2) = 1e-11
 Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
 Frame = -3

Query: 442 EDEAMV-ENDDSGEAKIKXXXXSRQNEKLYAAEGVLNTXXXXXXXXXXXXXXXXASMEED 266
           ED+ M  E +D+ +A       SRQNEKLY AEG+LNT                      
Sbjct: 496 EDQPMASEENDTNKANKGKTPSSRQNEKLYTAEGMLNTKMKRAEKKRRKKAGKVD----- 550

Query: 265 RSMEGDFDLKMDDV-KRGSTMDVGEEDNDGSVNEVTKNRFALPETVLELD 119
            +M+GD+D K+D   K+GS MDV  ED +G  ++  +    +P + ++LD
Sbjct: 551 -AMDGDYDFKVDYFKKKGSAMDV--EDGNGEADDDNQIIGTVPMSGVQLD 597



 Score = 45.1 bits (105), Expect(2) = 1e-11
 Identities = 20/39 (51%), Positives = 31/39 (79%)
 Frame = -1

Query: 645 DSSIIGSLKSVDDFNSVTITPNNPLVFDETMIETDKQSQ 529
           ++S IGSLKSV+DF+ V + P+ P+ F+E+MIE D ++Q
Sbjct: 441 ETSFIGSLKSVNDFDPVEVPPSCPISFNESMIEGDLEAQ 479


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