BLASTX nr result

ID: Atractylodes21_contig00025052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025052
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309217.1| predicted protein [Populus trichocarpa] gi|2...   352   1e-94
ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...   344   2e-92
emb|CBI27903.3| unnamed protein product [Vitis vinifera]              344   2e-92
ref|XP_002514120.1| conserved hypothetical protein [Ricinus comm...   330   6e-88
ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron sp...   327   4e-87

>ref|XP_002309217.1| predicted protein [Populus trichocarpa] gi|222855193|gb|EEE92740.1|
            predicted protein [Populus trichocarpa]
          Length = 977

 Score =  352 bits (902), Expect = 1e-94
 Identities = 175/217 (80%), Positives = 199/217 (91%)
 Frame = -3

Query: 1177 KGPLVAGTLAETIAATSRWGSRPSSEDIEKMRRDSAVARHASLVRLLEKKLALANGKIKK 998
            KGPLVAGTL ET+AA SRWG++PSSED+E+M RDSA+ARHASLV+ LE KLA A GK+KK
Sbjct: 697  KGPLVAGTLVETVAAISRWGNQPSSEDVEEMIRDSALARHASLVKHLENKLAQAKGKLKK 756

Query: 997  AEKALAKVQEYLQPSELPTDLETLTDEERFSLRKIGLSMKPYLELGRRGVFDGTIENMHL 818
            +EK LAKVQE L+P+ELPTDLET++DEERF  RKIGLSMKPYL LGRRGVFDGTIENMHL
Sbjct: 757  SEKDLAKVQENLEPTELPTDLETISDEERFLFRKIGLSMKPYLFLGRRGVFDGTIENMHL 816

Query: 817  HWKYRELVKIMVERKSFAQVKHVAISLEAESGGVLVSVDKTTKGYAIIVYRGKNYERPKA 638
            HWKYRELVKI+VERK  AQVKH+AISLEAESGGVLVSVD+TTKGYAIIVYRGKNY RP+A
Sbjct: 817  HWKYRELVKIIVERKGIAQVKHIAISLEAESGGVLVSVDRTTKGYAIIVYRGKNYMRPQA 876

Query: 637  MRPKNLLTKKKALARAIELQRREALKHHILELSERIE 527
            MRP+NLLT+++ALAR++ELQR EALKHHI +L ERIE
Sbjct: 877  MRPENLLTRRQALARSVELQRYEALKHHITDLQERIE 913


>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 884

 Score =  344 bits (883), Expect = 2e-92
 Identities = 173/220 (78%), Positives = 196/220 (89%)
 Frame = -3

Query: 1177 KGPLVAGTLAETIAATSRWGSRPSSEDIEKMRRDSAVARHASLVRLLEKKLALANGKIKK 998
            KGPLVAGTLAET+AATSRWGS PS ED+ KM RDSA+ARHASLVR + KKLA A  K+KK
Sbjct: 600  KGPLVAGTLAETLAATSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHAKAKLKK 659

Query: 997  AEKALAKVQEYLQPSELPTDLETLTDEERFSLRKIGLSMKPYLELGRRGVFDGTIENMHL 818
             EKAL KVQE L+P+ELP DLETL+DEERF  RKIGLSMKP+L LG RG+FDGT+ENMHL
Sbjct: 660  TEKALRKVQEDLEPAELPMDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHL 719

Query: 817  HWKYRELVKIMVERKSFAQVKHVAISLEAESGGVLVSVDKTTKGYAIIVYRGKNYERPKA 638
            HWKYRELVKI+V+ K+FAQVKH+AISLEAESGGVLVSVD+T KGYAIIVYRGKNY+RP A
Sbjct: 720  HWKYRELVKIIVKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRPHA 779

Query: 637  MRPKNLLTKKKALARAIELQRREALKHHILELSERIEKLK 518
            +RPKNLLTK++ALAR+IELQR EALKHHI +L ERI+ LK
Sbjct: 780  LRPKNLLTKRQALARSIELQRHEALKHHISDLEERIKLLK 819


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score =  344 bits (883), Expect = 2e-92
 Identities = 173/220 (78%), Positives = 196/220 (89%)
 Frame = -3

Query: 1177 KGPLVAGTLAETIAATSRWGSRPSSEDIEKMRRDSAVARHASLVRLLEKKLALANGKIKK 998
            KGPLVAGTLAET+AATSRWGS PS ED+ KM RDSA+ARHASLVR + KKLA A  K+KK
Sbjct: 597  KGPLVAGTLAETLAATSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHAKAKLKK 656

Query: 997  AEKALAKVQEYLQPSELPTDLETLTDEERFSLRKIGLSMKPYLELGRRGVFDGTIENMHL 818
             EKAL KVQE L+P+ELP DLETL+DEERF  RKIGLSMKP+L LG RG+FDGT+ENMHL
Sbjct: 657  TEKALRKVQEDLEPAELPMDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHL 716

Query: 817  HWKYRELVKIMVERKSFAQVKHVAISLEAESGGVLVSVDKTTKGYAIIVYRGKNYERPKA 638
            HWKYRELVKI+V+ K+FAQVKH+AISLEAESGGVLVSVD+T KGYAIIVYRGKNY+RP A
Sbjct: 717  HWKYRELVKIIVKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRPHA 776

Query: 637  MRPKNLLTKKKALARAIELQRREALKHHILELSERIEKLK 518
            +RPKNLLTK++ALAR+IELQR EALKHHI +L ERI+ LK
Sbjct: 777  LRPKNLLTKRQALARSIELQRHEALKHHISDLEERIKLLK 816


>ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
            gi|223546576|gb|EEF48074.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 930

 Score =  330 bits (845), Expect = 6e-88
 Identities = 165/220 (75%), Positives = 192/220 (87%)
 Frame = -3

Query: 1177 KGPLVAGTLAETIAATSRWGSRPSSEDIEKMRRDSAVARHASLVRLLEKKLALANGKIKK 998
            K PLVAGTLAET+AATS W  +  S DI++M R++ +A+ ASLV+ LE KLALA GK++K
Sbjct: 659  KVPLVAGTLAETVAATSHWRDQRGSPDIDEMLREAVLAKRASLVKHLENKLALAKGKLRK 718

Query: 997  AEKALAKVQEYLQPSELPTDLETLTDEERFSLRKIGLSMKPYLELGRRGVFDGTIENMHL 818
            AEKALAKV E+L PS LPTDLET++DEERF  RKIGLSMKPYL LG+RGV+DGTIENMHL
Sbjct: 719  AEKALAKVHEHLDPSGLPTDLETISDEERFLFRKIGLSMKPYLFLGKRGVYDGTIENMHL 778

Query: 817  HWKYRELVKIMVERKSFAQVKHVAISLEAESGGVLVSVDKTTKGYAIIVYRGKNYERPKA 638
            HWKYRELVK++V  KSFAQVKH+AISLEAESGGVLVS+++TTKGYAIIVYRGKNY  P+ 
Sbjct: 779  HWKYRELVKVIVRGKSFAQVKHIAISLEAESGGVLVSIERTTKGYAIIVYRGKNYLHPEV 838

Query: 637  MRPKNLLTKKKALARAIELQRREALKHHILELSERIEKLK 518
            MRPKNLLTK++AL R+IELQRREALKHHI +L ERIE LK
Sbjct: 839  MRPKNLLTKRQALVRSIELQRREALKHHISDLQERIELLK 878


>ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like, partial [Cucumis sativus]
          Length = 789

 Score =  327 bits (838), Expect = 4e-87
 Identities = 162/218 (74%), Positives = 189/218 (86%)
 Frame = -3

Query: 1171 PLVAGTLAETIAATSRWGSRPSSEDIEKMRRDSAVARHASLVRLLEKKLALANGKIKKAE 992
            PLVAGTL ETIAATSRWGS+PS  DIE MR DSA+A+  SL+  L+KKLALA  K+K AE
Sbjct: 557  PLVAGTLTETIAATSRWGSQPSGHDIENMREDSALAKLDSLIEYLKKKLALAKCKVKNAE 616

Query: 991  KALAKVQEYLQPSELPTDLETLTDEERFSLRKIGLSMKPYLELGRRGVFDGTIENMHLHW 812
            K +AK+QE  +PS+LPTDLET+TDEER   RKIGLSMKPYL LGRRGV+DGT+ENMHLHW
Sbjct: 617  KIIAKLQEKKEPSDLPTDLETITDEERLLFRKIGLSMKPYLLLGRRGVYDGTVENMHLHW 676

Query: 811  KYRELVKIMVERKSFAQVKHVAISLEAESGGVLVSVDKTTKGYAIIVYRGKNYERPKAMR 632
            K+RELVKI+V  K+  QVKHVAISLEAES GV++S+DKTTKGY +IVYRGKNY RP AMR
Sbjct: 677  KFRELVKIIVRGKTLQQVKHVAISLEAESNGVVISLDKTTKGYEVIVYRGKNYTRPDAMR 736

Query: 631  PKNLLTKKKALARAIELQRREALKHHILELSERIEKLK 518
            PKN+LT+++ALAR+IELQRREALKHHIL+L E+IE LK
Sbjct: 737  PKNMLTRRQALARSIELQRREALKHHILDLEEKIELLK 774


Top