BLASTX nr result

ID: Atractylodes21_contig00025040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025040
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267...   110   9e-23
emb|CAN59836.1| hypothetical protein VITISV_017622 [Vitis vinifera]   110   9e-23
ref|XP_002314306.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002523727.1| conserved hypothetical protein [Ricinus comm...    81   8e-14
ref|XP_002331479.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267175 [Vitis vinifera]
          Length = 1226

 Score =  110 bits (276), Expect = 9e-23
 Identities = 68/153 (44%), Positives = 93/153 (60%), Gaps = 11/153 (7%)
 Frame = -1

Query: 428  EKHK----DPTSVLHGYSNNGSSNDSRVEAVSDAKVEKAG---VAPGELHNGVEIHSK-- 276
            EKH+     P S +   S   SS D  V+ +++ +++KAG   +   + HN VE   K  
Sbjct: 748  EKHRIQNGSPVSAVQQGSLIRSSIDPNVDLIANVEIKKAGAFQLYQRDTHNTVENERKPL 807

Query: 275  -SDNTDDNKTNSARGVPNFTMKKPFSEVVAGSAATSSGFPPLQS-KKASLASENATKEKH 102
                +DD K +  RG+P FTM+KPFSEVVAGSA   SGFPPLQ  K+ SL SE   K+  
Sbjct: 808  EDIKSDDKKISFGRGLPKFTMRKPFSEVVAGSATVDSGFPPLQQMKQPSLGSEKGIKQSS 867

Query: 101  ARETSMVKVHEINDNQGSKKVDDNSSVHETVDG 3
            AR+ S  +VHE  D QGS+K+++ SSV ET++G
Sbjct: 868  ARDRSAEQVHETADFQGSQKLEEYSSVLETLNG 900


>emb|CAN59836.1| hypothetical protein VITISV_017622 [Vitis vinifera]
          Length = 1252

 Score =  110 bits (276), Expect = 9e-23
 Identities = 68/153 (44%), Positives = 93/153 (60%), Gaps = 11/153 (7%)
 Frame = -1

Query: 428  EKHK----DPTSVLHGYSNNGSSNDSRVEAVSDAKVEKAG---VAPGELHNGVEIHSK-- 276
            EKH+     P S +   S   SS D  V+ +++ +++KAG   +   + HN VE   K  
Sbjct: 595  EKHRIQNGSPVSAVQQGSLIRSSIDPNVDLIANVEIKKAGAFQLYQRDTHNTVENERKPL 654

Query: 275  -SDNTDDNKTNSARGVPNFTMKKPFSEVVAGSAATSSGFPPLQS-KKASLASENATKEKH 102
                +DD K +  RG+P FTM+KPFSEVVAGSA   SGFPPLQ  K+ SL SE   K+  
Sbjct: 655  EDIKSDDKKISFGRGLPKFTMRKPFSEVVAGSATVDSGFPPLQQMKQPSLGSEKGIKQSS 714

Query: 101  ARETSMVKVHEINDNQGSKKVDDNSSVHETVDG 3
            AR+ S  +VHE  D QGS+K+++ SSV ET++G
Sbjct: 715  ARDRSAEQVHETADFQGSQKLEEYSSVLETLNG 747


>ref|XP_002314306.1| predicted protein [Populus trichocarpa] gi|222850714|gb|EEE88261.1|
            predicted protein [Populus trichocarpa]
          Length = 869

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 4/129 (3%)
 Frame = -1

Query: 377  SSNDSRVEAVSDAKVEKAGVAPGELHNGVEIHSK---SDNTDDNKTNSARGVPNFTMKKP 207
            SS+D +VE   D   +K      ++  GVE   K   +   DD K +  R +PNFTM+KP
Sbjct: 617  SSSDPQVEFNGDVDRKKTVFYSADMETGVENQRKLSVNSKLDDKKISFGRNIPNFTMRKP 676

Query: 206  FSEVVAGSAATSSGFPPLQSKKASLA-SENATKEKHARETSMVKVHEINDNQGSKKVDDN 30
            FSEVVAGS+AT SGFPPLQ +K   + SE  +++  AR+  + +VH     QGS K +D 
Sbjct: 677  FSEVVAGSSATDSGFPPLQQRKQHPSISEKGSRKNWARDRIVEQVHP-KVVQGSHKSEDM 735

Query: 29   SSVHETVDG 3
            S V ET++G
Sbjct: 736  SPVQETLNG 744


>ref|XP_002523727.1| conserved hypothetical protein [Ricinus communis]
            gi|223537031|gb|EEF38667.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1233

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
 Frame = -1

Query: 308  ELHNGVEIHSK---SDNTDDNKTNSARGVPNFTMKKPFSEVVAGSAATSSGFPPLQSKK- 141
            ++  GVE   K   +    D K +  RG+PNFTM+KPFSEVVAGS+   SGFPPLQ +K 
Sbjct: 804  DIQGGVENQGKLLENGKIGDKKNSFGRGIPNFTMRKPFSEVVAGSSTNDSGFPPLQQRKH 863

Query: 140  ASLASENATKEKHARETSMVKVHEINDNQGSKKVDDNSSVHETVD 6
             S  +E   K   AR+ +   VH   D QGSKK  D  S  ET++
Sbjct: 864  PSSDTERGVKTNRARDRNAEHVHTTVD-QGSKKYIDTISGQETLN 907


>ref|XP_002331479.1| predicted protein [Populus trichocarpa] gi|222873557|gb|EEF10688.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
 Frame = -1

Query: 377 SSNDSRVEAVSDAKVEKAGVAPGELHNGVEIHSK---SDNTDDNKTNSARGVPNFTMKKP 207
           SS D +V+   D   +K     G++  GVE   K   +    + + +  R +PNFTM+KP
Sbjct: 182 SSTDPQVDFNGDVDRKKTVFFSGDMDTGVENQRKLSVNSKLYEKEISFGRIIPNFTMRKP 241

Query: 206 FSEVVAGSAATSSGFPPLQSKKASLASENATKEK 105
           FSEVVAG +A  SGFPP   +  S++ + + K +
Sbjct: 242 FSEVVAGLSAADSGFPPTAKQHPSISEKASHKSE 275


Top