BLASTX nr result

ID: Atractylodes21_contig00025023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00025023
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27690.3| unnamed protein product [Vitis vinifera]              212   3e-53
ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-...   212   3e-53
ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|2...   211   4e-53
emb|CAN72250.1| hypothetical protein VITISV_016331 [Vitis vinifera]   211   6e-53
gb|AAD46042.1|AC007519_27 F16N3.15 [Arabidopsis thaliana]             197   7e-49

>emb|CBI27690.3| unnamed protein product [Vitis vinifera]
          Length = 1150

 Score =  212 bits (539), Expect = 3e-53
 Identities = 99/141 (70%), Positives = 111/141 (78%)
 Frame = +3

Query: 6    IHSEVNVSSFEKQGWCKITRNPDLSSATLQNKSLNVIFVDGTDVLSEGTIMISCGSEIIP 185
            I S+V   SF+KQ WCK+TRN D  SAT+QNKS N I VD   + SE +I+I CGSEIIP
Sbjct: 727  ICSDVMFPSFDKQEWCKVTRNSDQCSATIQNKSSNTILVDEVAIPSEDSIVIKCGSEIIP 786

Query: 186  GPASAGYLRYRFNVMPMKESPKKVLKISLDSEHAKCSICLNIWHDVVTVGPCLHNFCNGC 365
            GP + GYL YRF VM  +ES K+ LKI LD EHAKCSICLNIWHDVVTV PCLHNFCNGC
Sbjct: 787  GPKNEGYLSYRFEVMSPQESIKEQLKICLDVEHAKCSICLNIWHDVVTVAPCLHNFCNGC 846

Query: 366  FSEWMRRSQEKHSSVLCPHCR 428
            FSEW+RRSQ KHS+VLCP CR
Sbjct: 847  FSEWLRRSQNKHSNVLCPQCR 867


>ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like [Vitis vinifera]
          Length = 462

 Score =  212 bits (539), Expect = 3e-53
 Identities = 99/141 (70%), Positives = 111/141 (78%)
 Frame = +3

Query: 6   IHSEVNVSSFEKQGWCKITRNPDLSSATLQNKSLNVIFVDGTDVLSEGTIMISCGSEIIP 185
           I S+V   SF+KQ WCK+TRN D  SAT+QNKS N I VD   + SE +I+I CGSEIIP
Sbjct: 39  ICSDVMFPSFDKQEWCKVTRNSDQCSATIQNKSSNTILVDEVAIPSEDSIVIKCGSEIIP 98

Query: 186 GPASAGYLRYRFNVMPMKESPKKVLKISLDSEHAKCSICLNIWHDVVTVGPCLHNFCNGC 365
           GP + GYL YRF VM  +ES K+ LKI LD EHAKCSICLNIWHDVVTV PCLHNFCNGC
Sbjct: 99  GPKNEGYLSYRFEVMSPQESIKEQLKICLDVEHAKCSICLNIWHDVVTVAPCLHNFCNGC 158

Query: 366 FSEWMRRSQEKHSSVLCPHCR 428
           FSEW+RRSQ KHS+VLCP CR
Sbjct: 159 FSEWLRRSQNKHSNVLCPQCR 179


>ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|222871849|gb|EEF08980.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  211 bits (538), Expect = 4e-53
 Identities = 97/141 (68%), Positives = 114/141 (80%)
 Frame = +3

Query: 6   IHSEVNVSSFEKQGWCKITRNPDLSSATLQNKSLNVIFVDGTDVLSEGTIMISCGSEIIP 185
           I SE+  +S EK  WCKITRN D SSA +QNKSLN I VD   V +E  ++I+CGSEIIP
Sbjct: 41  ICSEITSTSLEKHEWCKITRNSDQSSAMMQNKSLNTILVDEATVQNEDDVVINCGSEIIP 100

Query: 186 GPASAGYLRYRFNVMPMKESPKKVLKISLDSEHAKCSICLNIWHDVVTVGPCLHNFCNGC 365
           GPA  GYL YRF +MP +ES  + LK+S+D+EHAKCSICLN+WHDVVTV PCLHNFCNGC
Sbjct: 101 GPAREGYLSYRFKLMP-RESFTRWLKVSIDAEHAKCSICLNVWHDVVTVAPCLHNFCNGC 159

Query: 366 FSEWMRRSQEKHSSVLCPHCR 428
           FSEW+RRSQE+H+SVLCP CR
Sbjct: 160 FSEWLRRSQERHASVLCPQCR 180


>emb|CAN72250.1| hypothetical protein VITISV_016331 [Vitis vinifera]
          Length = 436

 Score =  211 bits (536), Expect = 6e-53
 Identities = 99/141 (70%), Positives = 110/141 (78%)
 Frame = +3

Query: 6   IHSEVNVSSFEKQGWCKITRNPDLSSATLQNKSLNVIFVDGTDVLSEGTIMISCGSEIIP 185
           I S+V  SSF+KQ WCK+TRN D  SAT+QNKS N I VD   + SE +I+I CGSEIIP
Sbjct: 26  ICSDVMFSSFDKQEWCKVTRNSDXCSATIQNKSSNTILVDEVAIPSEDSIVIKCGSEIIP 85

Query: 186 GPASAGYLRYRFNVMPMKESPKKVLKISLDSEHAKCSICLNIWHDVVTVGPCLHNFCNGC 365
            P   GYL YRF VM  +ES K+ LKI LD EHAKCSICLNIWHDVVTV PCLHNFCNGC
Sbjct: 86  XPKXEGYLSYRFEVMSPQESIKEQLKICLDVEHAKCSICLNIWHDVVTVAPCLHNFCNGC 145

Query: 366 FSEWMRRSQEKHSSVLCPHCR 428
           FSEW+RRSQ KHS+VLCP CR
Sbjct: 146 FSEWLRRSQNKHSNVLCPQCR 166


>gb|AAD46042.1|AC007519_27 F16N3.15 [Arabidopsis thaliana]
          Length = 473

 Score =  197 bits (501), Expect = 7e-49
 Identities = 90/141 (63%), Positives = 105/141 (74%)
 Frame = +3

Query: 6   IHSEVNVSSFEKQGWCKITRNPDLSSATLQNKSLNVIFVDGTDVLSEGTIMISCGSEIIP 185
           I SE+  SS EK  WC+IT+N   SSAT+ NKS + I VD   V  +G + I  GSEI+P
Sbjct: 50  ICSEIKPSSLEKHEWCRITKNLGQSSATIHNKSSDAILVDKAVVPKDGAVDIISGSEIVP 109

Query: 186 GPASAGYLRYRFNVMPMKESPKKVLKISLDSEHAKCSICLNIWHDVVTVGPCLHNFCNGC 365
           GP   GYL+YRF +MP  ES  ++L+IS+D EHAKCSICLNIWHDVVT  PCLHNFCNGC
Sbjct: 110 GPEEQGYLQYRFTIMPAPESRTQLLQISIDPEHAKCSICLNIWHDVVTAAPCLHNFCNGC 169

Query: 366 FSEWMRRSQEKHSSVLCPHCR 428
           FSEWMRRS+EKH  VLCP CR
Sbjct: 170 FSEWMRRSEEKHKHVLCPQCR 190


Top