BLASTX nr result

ID: Atractylodes21_contig00024974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024974
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518705.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   158   4e-37
ref|XP_003528520.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   157   7e-37
ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH...   155   2e-36
emb|CBI32382.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_003607923.1| E3 ubiquitin-protein ligase MARCH6 [Medicago...   155   3e-36

>ref|XP_003518705.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Glycine max]
          Length = 1123

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/96 (78%), Positives = 83/96 (86%)
 Frame = -2

Query: 289  IRYSVEQVRTRRATVLVGQIWKWCXXXXXXXXXXXIWIFVIPVLIGLLFELLVIVPMRVP 110
            +RYS+EQ+R RR++VL GQIWKWC           IWIFVIPVLIGLLFELLVIVPMRVP
Sbjct: 871  VRYSIEQIRKRRSSVLFGQIWKWCGILVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVP 930

Query: 109  VDESPVFLLYQDWALGLIFLKIWTRLVMLDHVLPMV 2
            VDESPVFLLYQDWALGLIFLKIWTRLVMLDH++P+V
Sbjct: 931  VDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLV 966


>ref|XP_003528520.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Glycine max]
          Length = 1124

 Score =  157 bits (398), Expect = 7e-37
 Identities = 74/96 (77%), Positives = 83/96 (86%)
 Frame = -2

Query: 289  IRYSVEQVRTRRATVLVGQIWKWCXXXXXXXXXXXIWIFVIPVLIGLLFELLVIVPMRVP 110
            +RYS+EQ+R RR++VL GQ+WKWC           IWIFVIPVLIGLLFELLVIVPMRVP
Sbjct: 872  VRYSIEQIRKRRSSVLFGQLWKWCGILVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVP 931

Query: 109  VDESPVFLLYQDWALGLIFLKIWTRLVMLDHVLPMV 2
            VDESPVFLLYQDWALGLIFLKIWTRLVMLDH++P+V
Sbjct: 932  VDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLV 967


>ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH6 [Vitis vinifera]
          Length = 1195

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/96 (76%), Positives = 82/96 (85%)
 Frame = -2

Query: 289  IRYSVEQVRTRRATVLVGQIWKWCXXXXXXXXXXXIWIFVIPVLIGLLFELLVIVPMRVP 110
            +RYS+E ++TRRA VL+ Q+WKWC           IWIFVIPVLIGLLFELLVIVPMRVP
Sbjct: 941  VRYSIEHIKTRRAVVLLSQMWKWCVIVIKSSVLLSIWIFVIPVLIGLLFELLVIVPMRVP 1000

Query: 109  VDESPVFLLYQDWALGLIFLKIWTRLVMLDHVLPMV 2
            VDESPVFLLYQDWALGLIFLKIWTRLVMLDH++P+V
Sbjct: 1001 VDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLV 1036


>emb|CBI32382.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/96 (76%), Positives = 82/96 (85%)
 Frame = -2

Query: 289  IRYSVEQVRTRRATVLVGQIWKWCXXXXXXXXXXXIWIFVIPVLIGLLFELLVIVPMRVP 110
            +RYS+E ++TRRA VL+ Q+WKWC           IWIFVIPVLIGLLFELLVIVPMRVP
Sbjct: 856  VRYSIEHIKTRRAVVLLSQMWKWCVIVIKSSVLLSIWIFVIPVLIGLLFELLVIVPMRVP 915

Query: 109  VDESPVFLLYQDWALGLIFLKIWTRLVMLDHVLPMV 2
            VDESPVFLLYQDWALGLIFLKIWTRLVMLDH++P+V
Sbjct: 916  VDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLV 951


>ref|XP_003607923.1| E3 ubiquitin-protein ligase MARCH6 [Medicago truncatula]
            gi|355508978|gb|AES90120.1| E3 ubiquitin-protein ligase
            MARCH6 [Medicago truncatula]
          Length = 1112

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/96 (76%), Positives = 82/96 (85%)
 Frame = -2

Query: 289  IRYSVEQVRTRRATVLVGQIWKWCXXXXXXXXXXXIWIFVIPVLIGLLFELLVIVPMRVP 110
            +RYS+EQ+R RR +VL+ QIWKWC           IWIFVIPVLIGLLFELLVIVPMRVP
Sbjct: 860  VRYSIEQIRKRRTSVLLNQIWKWCSIVVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVP 919

Query: 109  VDESPVFLLYQDWALGLIFLKIWTRLVMLDHVLPMV 2
            VDESPVFLLYQDWALGLIFLKIWTRLVMLDH++P++
Sbjct: 920  VDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLM 955


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