BLASTX nr result

ID: Atractylodes21_contig00024973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024973
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   201   7e-50
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   149   3e-34
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   142   3e-32
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   140   9e-32
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...   140   1e-31

>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  201 bits (510), Expect = 7e-50
 Identities = 104/184 (56%), Positives = 123/184 (66%), Gaps = 8/184 (4%)
 Frame = -2

Query: 528 NNKHGGYEKKPKLACWICGKTGHLKKDCRV--------RNRXXXXXXXXXXXXXXXXXQV 373
           NN + G  K+ K  CWIC K GH K+DCR         + R                  V
Sbjct: 182 NNTNDGSNKRFKSVCWICNKPGHFKRDCRAAKDKNKMQQKRFGQGSKDQDPSSHQGQNSV 241

Query: 372 LDLGIPDNSEKNYGSLTVGAFYVQDDDSAWWIDSGATSHVCKDRKWFKTFEPVEDGSVLH 193
            DL    +S+  Y S     FYVQDD+ AWWIDSGAT HVCKDR WFKT+EPV+DGSVL+
Sbjct: 242 FDL----HSKVYYVSKIAEVFYVQDDEVAWWIDSGATIHVCKDRGWFKTYEPVQDGSVLY 297

Query: 192 MGNESSASIIGRGSVSLVFSSGKTLALDNVLLVPEIRKNLVSGSLLNKCGFKQVFESDKF 13
           MGNES+A I+GRG V L FSSGKTL L++V+ VP IRKNLVSGS+LNKCGFKQV+ESDK+
Sbjct: 298 MGNESTAPILGRGKVVLEFSSGKTLDLNDVIHVPGIRKNLVSGSVLNKCGFKQVYESDKY 357

Query: 12  ILSK 1
           +LSK
Sbjct: 358 VLSK 361


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  149 bits (376), Expect = 3e-34
 Identities = 82/179 (45%), Positives = 104/179 (58%), Gaps = 7/179 (3%)
 Frame = -2

Query: 516 GGYEKKPKLA--CWICGKTGHLKKDCRVRNRXXXXXXXXXXXXXXXXXQVLDLGIPDNSE 343
           GG  KKPK    C+ CGK GH   DCR+  +                    +  + DN  
Sbjct: 268 GGISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPK----------------EANVIDNIT 311

Query: 342 KNYGSLTVGAFY-----VQDDDSAWWIDSGATSHVCKDRKWFKTFEPVEDGSVLHMGNES 178
           KN  ++ + A       V  +   WWID+GAT HVC D+K F TFEP+E+G  + MGN +
Sbjct: 312 KNVSNIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNST 371

Query: 177 SASIIGRGSVSLVFSSGKTLALDNVLLVPEIRKNLVSGSLLNKCGFKQVFESDKFILSK 1
           ++ I G+G V L  +SGK L L NVL VPEIRKNLVSGSLLN  GF+ VFES+KF+LSK
Sbjct: 372 TSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFESNKFVLSK 430


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  142 bits (358), Expect = 3e-32
 Identities = 79/179 (44%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
 Frame = -2

Query: 516 GGYEKKPKLA--CWICGKTGHLKKDCRVRNRXXXXXXXXXXXXXXXXXQVLDLGIPDNSE 343
           GG  KKPK    C+ CGK GH   DCR+  +                    +  + DN  
Sbjct: 268 GGISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPK----------------EANVIDNIT 311

Query: 342 KNYGSLTVGAFY-----VQDDDSAWWIDSGATSHVCKDRKWFKTFEPVEDGSVLHMGNES 178
           KN   + +         V  +   WWID+GAT HVC D+K F TFEP+E+G  + MGN +
Sbjct: 312 KNVSDIDLTTVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNST 371

Query: 177 SASIIGRGSVSLVFSSGKTLALDNVLLVPEIRKNLVSGSLLNKCGFKQVFESDKFILSK 1
           ++ I G+G V L  +SGK L L NVL VPEIRKNLV GSLLN  GF+ VFES+K +LSK
Sbjct: 372 TSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVFGSLLNNHGFRLVFESNKVVLSK 430


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  140 bits (354), Expect = 9e-32
 Identities = 79/179 (44%), Positives = 101/179 (56%), Gaps = 7/179 (3%)
 Frame = -2

Query: 516 GGYEKKPKLA--CWICGKTGHLKKDCRVRNRXXXXXXXXXXXXXXXXXQVLDLGIPDNSE 343
           GG  KKPK    C+ CGK GH   DCR+  +                    +  + D+  
Sbjct: 268 GGISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPK----------------EANVIDDIT 311

Query: 342 KNYGSLTVGAFY-----VQDDDSAWWIDSGATSHVCKDRKWFKTFEPVEDGSVLHMGNES 178
           KN   + + A       V  +   WWID+GAT HVC D+K F TFEP+E+G  + MGN +
Sbjct: 312 KNVYDIDLTAVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSA 371

Query: 177 SASIIGRGSVSLVFSSGKTLALDNVLLVPEIRKNLVSGSLLNKCGFKQVFESDKFILSK 1
           ++ I G+G V L  +SGK L L NVL VPEIRKNLVSGSLLN  GF+ VF S+K +LSK
Sbjct: 372 TSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFXSNKVVLSK 430


>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
           vinifera]
          Length = 478

 Score =  140 bits (353), Expect = 1e-31
 Identities = 78/179 (43%), Positives = 101/179 (56%), Gaps = 7/179 (3%)
 Frame = -2

Query: 516 GGYEKKPKLA--CWICGKTGHLKKDCRVRNRXXXXXXXXXXXXXXXXXQVLDLGIPDNSE 343
           GG  KKPK    C+ CGK GH   DCR+  +                    +  + D+  
Sbjct: 268 GGISKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPK----------------EANVIDDIT 311

Query: 342 KNYGSLTVGAFY-----VQDDDSAWWIDSGATSHVCKDRKWFKTFEPVEDGSVLHMGNES 178
           KN   + +         V  +   WWID+GAT HVC D+K F TFEP+E+G  + MGN +
Sbjct: 312 KNVYDIDLTTVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSA 371

Query: 177 SASIIGRGSVSLVFSSGKTLALDNVLLVPEIRKNLVSGSLLNKCGFKQVFESDKFILSK 1
           ++ I G+G V L  +SGK L L NVL VPEIRKNLVSGSLLN  GF+ VF+S+K +LSK
Sbjct: 372 TSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFDSNKVVLSK 430


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