BLASTX nr result

ID: Atractylodes21_contig00024949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024949
         (1556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 hom...   338   3e-90
ref|XP_002530196.1| rRNA-processing protein UTP23, putative [Ric...   310   7e-82
ref|XP_002328233.1| predicted protein [Populus trichocarpa] gi|2...   303   8e-80
ref|XP_003545538.1| PREDICTED: rRNA-processing protein UTP23 hom...   300   5e-79
ref|XP_003519465.1| PREDICTED: rRNA-processing protein UTP23 hom...   297   6e-78

>ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 homolog [Vitis vinifera]
            gi|296082256|emb|CBI21261.3| unnamed protein product
            [Vitis vinifera]
          Length = 284

 Score =  338 bits (866), Expect = 3e-90
 Identities = 168/264 (63%), Positives = 205/264 (77%), Gaps = 4/264 (1%)
 Frame = -3

Query: 1212 MRLKKQKRHRRSVRFYTTCFGFRSPFKVLCDGTFIHHLLVNRITPADTALSNILGAPVKM 1033
            MRLKKQKRHR+ VRFYT CFGFR PFKVLCDGTF+HHL+VN I+P D A+S ILGAPVK+
Sbjct: 1    MRLKKQKRHRKIVRFYTACFGFRQPFKVLCDGTFVHHLIVNHISPPDNAVSTILGAPVKL 60

Query: 1032 FTTRCVLAELKSLGEAYSDSLTVARDLVPARCDHEKRKSAVTCLAEVIGEDNSEHFFVAS 853
             TTRCVLAELKSLG++YS+SL  A  L+ ARCDHE+RKSA  C  E+IGE+N EHFFVA+
Sbjct: 61   MTTRCVLAELKSLGDSYSESLKAAGKLIAARCDHERRKSAEACFVEIIGENNPEHFFVAT 120

Query: 852  QDADLRKKFQQIPAVPVIFALRNALFLEPPSQSQQQFAKSVEEQRSHMNELEFKMLLNKK 673
            QD DLRKKFQ+IP VPVIF LRNAL LEPPS SQ+QF KS EE+R HM ELE K+L  ++
Sbjct: 121  QDTDLRKKFQEIPGVPVIFGLRNALLLEPPSVSQRQFVKSSEEERLHMTELEHKLLSKRQ 180

Query: 672  KRSSAMEEPGDSSEADEVLPDK---IIEELKKNAAKRKTDVKDKVQFKRKRAKGPNPLSC 502
            K     +E  DSS+ +E L D+   +     +N AKR+  VKD+VQFKR +AKGPNPLSC
Sbjct: 181  KNRLTSKETKDSSDENEALEDQNLGLQAATNENNAKRRMVVKDRVQFKRNKAKGPNPLSC 240

Query: 501  KKKKNENQKHVA-KKEGNESVETL 433
            KKKK++ Q + A +KE  ++ +T+
Sbjct: 241  KKKKSQRQPNPASEKEDKDAGKTV 264


>ref|XP_002530196.1| rRNA-processing protein UTP23, putative [Ricinus communis]
            gi|223530289|gb|EEF32186.1| rRNA-processing protein
            UTP23, putative [Ricinus communis]
          Length = 290

 Score =  310 bits (794), Expect = 7e-82
 Identities = 155/244 (63%), Positives = 190/244 (77%), Gaps = 1/244 (0%)
 Frame = -3

Query: 1212 MRLKKQKRHRRSVRFYTTCFGFRSPFKVLCDGTFIHHLLVNRITPADTALSNILGAPVKM 1033
            MR++KQKRHRR+VRFY TC+GFR P+K+LCDGTF+HHL+VNRI PAD AL+NILG PVK+
Sbjct: 1    MRVRKQKRHRRAVRFYVTCYGFRQPYKILCDGTFVHHLIVNRIAPADEALANILGGPVKL 60

Query: 1032 FTTRCVLAELKSLGEAYSDSLTVARDLVPARCDHEKRKSAVTCLAEVIGEDNSEHFFVAS 853
            FTTRCV AELK LG++YS+SL  A  L+ ARCDHEK KSA  C+ EVIG++N EHFFVA+
Sbjct: 61   FTTRCVHAELKRLGKSYSESLQAAHLLMTARCDHEKVKSAEACILEVIGQNNPEHFFVAT 120

Query: 852  QDADLRKKFQQIPAVPVIFALRNALFLEPPSQSQQQFAKSVEEQRSHMNELEFKMLLNKK 673
            QD DLRKKF+++PAVP+IF LRN+L LEPPS  Q  F K+ EE+R H  ELE KML  K 
Sbjct: 121  QDFDLRKKFREVPAVPLIFGLRNSLHLEPPSAFQHAFVKASEEERLHATELEQKML--KT 178

Query: 672  KRSSAMEEPGD-SSEADEVLPDKIIEELKKNAAKRKTDVKDKVQFKRKRAKGPNPLSCKK 496
               S +   G+     D+ L  + +E  KK++A+ KTDVKD+ QFKRKRAKGPNPLSCKK
Sbjct: 179  TTKSILGHEGEIEGPKDQNLEMQPVE--KKHSARNKTDVKDRPQFKRKRAKGPNPLSCKK 236

Query: 495  KKNE 484
            KK +
Sbjct: 237  KKKD 240


>ref|XP_002328233.1| predicted protein [Populus trichocarpa] gi|222837748|gb|EEE76113.1|
            predicted protein [Populus trichocarpa]
          Length = 251

 Score =  303 bits (776), Expect = 8e-80
 Identities = 147/243 (60%), Positives = 190/243 (78%), Gaps = 1/243 (0%)
 Frame = -3

Query: 1212 MRLKKQKRHRRSVRFYTTCFGFRSPFKVLCDGTFIHHLLVNRITPADTALSNILGAPVKM 1033
            MR+KKQKRHRR+VRFYT CFGFR P+KVLCDGTFIHHL+VN I PADTA+SNILG  VK+
Sbjct: 1    MRVKKQKRHRRAVRFYTACFGFRQPYKVLCDGTFIHHLIVNNIAPADTAISNILGGSVKL 60

Query: 1032 FTTRCVLAELKSLGEAYSDSLTVARDLVPARCDHEKRKSAVTCLAEVIGEDNSEHFFVAS 853
            FTTRCVLAELK LG++Y++SL  A  L+ ARCDHE+ K+A  C+ E+IGE+N +HF+V +
Sbjct: 61   FTTRCVLAELKRLGKSYTESLQAANTLMIARCDHEQNKNAEGCIVEIIGENNPDHFYVGT 120

Query: 852  QDADLRKKFQQIPAVPVIFALRNALFLEPPSQSQQQFAKSVEEQRSHMNELEFKMLLNKK 673
            QD D+RKKFQ++P VP+IF LRNALFL+PPS  Q+QFAK+ EE+RSHM E E  +L  + 
Sbjct: 121  QDTDMRKKFQEVPGVPLIFGLRNALFLQPPSAFQRQFAKNSEEERSHMTEKEVALLKKRT 180

Query: 672  KRSSAMEEPGDSSEADEVLPDKIIE-ELKKNAAKRKTDVKDKVQFKRKRAKGPNPLSCKK 496
            K      E GDSS+ +    D+ +E + +K ++++   VKD+ QFKR +AKGPNPLS +K
Sbjct: 181  KDLVENWEIGDSSDENGGPEDENLEMQPQKYSSRKGMKVKDRPQFKRNKAKGPNPLSVQK 240

Query: 495  KKN 487
            KK+
Sbjct: 241  KKS 243


>ref|XP_003545538.1| PREDICTED: rRNA-processing protein UTP23 homolog [Glycine max]
          Length = 285

 Score =  300 bits (769), Expect = 5e-79
 Identities = 153/288 (53%), Positives = 198/288 (68%), Gaps = 8/288 (2%)
 Frame = -3

Query: 1212 MRLKKQKRHRRSVRFYTTCFGFRSPFKVLCDGTFIHHLLVNRITPADTALSNILGAPVKM 1033
            M++KKQKRHR+ + FYT CFGFR P+KVLCDGTF+HHLLVNRITPADTA+ N+L A +K+
Sbjct: 1    MKVKKQKRHRKILTFYTACFGFRKPYKVLCDGTFVHHLLVNRITPADTAIGNVLSATIKL 60

Query: 1032 FTTRCVLAELKSLGEAYSDSLTVARDLVPARCDHEKRKSAVTCLAEVIGEDNSEHFFVAS 853
            +TTRCVLAELK LG +YS++L  A  L+ ARC+HEK KSA  C+ EV+GE NSEHFFVAS
Sbjct: 61   YTTRCVLAELKRLGSSYSEALEAAHKLIVARCEHEKCKSADACIMEVVGEKNSEHFFVAS 120

Query: 852  QDADLRKKFQQIPAVPVIFALRNALFLEPPSQSQQQFAKSVEEQRSHMNELEFKMLLNKK 673
            QD DLRK+ Q++P VP+IF LRNALFLE PS  Q+Q+ K+ EE R HM + E+++  ++ 
Sbjct: 121  QDTDLRKQLQEVPGVPLIFGLRNALFLESPSAFQRQYVKTSEEGRLHMTQKEYQIFKDRV 180

Query: 672  KRSSAMEEPGDS--------SEADEVLPDKIIEELKKNAAKRKTDVKDKVQFKRKRAKGP 517
                  EE  +S           D+ +  + +E  K   ++ + ++KD+ QFKRKRAKGP
Sbjct: 181  MNRLTGEEANNSITEIMEIEDSEDQTINVQAVE--KGITSRNRMEIKDEPQFKRKRAKGP 238

Query: 516  NPLSCKKKKNENQKHVAKKEGNESVETLXXXXXXXXXSHKQKNPTNVT 373
            NPLSCKKKK+E Q     KE NE  +           SHKQK  T  +
Sbjct: 239  NPLSCKKKKSEKQNIGPLKETNE--DNTVKRSRKRKRSHKQKMATETS 284


>ref|XP_003519465.1| PREDICTED: rRNA-processing protein UTP23 homolog [Glycine max]
          Length = 285

 Score =  297 bits (760), Expect = 6e-78
 Identities = 153/266 (57%), Positives = 191/266 (71%), Gaps = 8/266 (3%)
 Frame = -3

Query: 1212 MRLKKQKRHRRSVRFYTTCFGFRSPFKVLCDGTFIHHLLVNRITPADTALSNILGAPVKM 1033
            M++KKQKRHR+ + FYT CFGFR PFKVLCDGTF+HHLLVNRITPADTA+ N+L A VK+
Sbjct: 1    MKVKKQKRHRKILTFYTACFGFRKPFKVLCDGTFVHHLLVNRITPADTAIGNVLSATVKL 60

Query: 1032 FTTRCVLAELKSLGEAYSDSLTVARDLVPARCDHEKRKSAVTCLAEVIGEDNSEHFFVAS 853
            +TTRCVLAEL  LG +YS++L  A  L+ ARC+HEK KSA  C+ EV+G  NSEHFFVAS
Sbjct: 61   YTTRCVLAELNRLGSSYSEALEAAHKLIVARCEHEKCKSADACIMEVVGGKNSEHFFVAS 120

Query: 852  QDADLRKKFQQIPAVPVIFALRNALFLEPPSQSQQQFAKSVEEQRSHMNELEFKMLLNKK 673
            QD DLRKK Q++P VP+IF LRNALFLE PS  Q+Q+ K+ EE R HM + E+++  ++ 
Sbjct: 121  QDTDLRKKLQEVPGVPLIFGLRNALFLESPSAFQRQYVKTSEEGRLHMTQKEYQIFKDRV 180

Query: 672  KRSSAMEEPGDS----SEADEVLPDKI-IEELKKN-AAKRKTDVKDKVQFKRKRAKGPNP 511
                  EE   S     E D+     I ++ +KK   A+   ++KDK QFKRKRAKGPNP
Sbjct: 181  MNRLTGEEANHSISQIMENDDSEDQTINVQAVKKGITARNHMEIKDKPQFKRKRAKGPNP 240

Query: 510  LSCKKKKNENQKHVAKKE--GNESVE 439
            LSCKKKK+E Q     KE  G+ SV+
Sbjct: 241  LSCKKKKSEKQNIGPLKETDGDNSVK 266