BLASTX nr result

ID: Atractylodes21_contig00024939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024939
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518435.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
ref|XP_002892665.1| hypothetical protein ARALYDRAFT_312224 [Arab...    60   1e-07
gb|AAC17624.1| Contains similarity to hypothetical protein gb|U9...    59   4e-07
ref|NP_172658.2| Core-2/I-branching beta-1,6-N-acetylglucosaminy...    59   4e-07
ref|XP_002264137.1| PREDICTED: uncharacterized protein LOC100262...    57   2e-06

>ref|XP_002518435.1| conserved hypothetical protein [Ricinus communis]
           gi|223542280|gb|EEF43822.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 405

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
 Frame = +1

Query: 52  MILQ*EVGTPEGTMMKRVPPVSSVPQN-LWLIWKXXXXXXXXXXXXXXXRIQF---YYDT 219
           MI+    G    TM K+ PPV   P++ +WL WK               R+ F   +Y +
Sbjct: 1   MIMSIAGGGGGRTMTKKAPPVP--PRHVIWLGWKLVIILSVSLCVFALLRLHFQSDHYSS 58

Query: 220 PPQSSSARV---YRRSQLPIWKDDEGFEGNPRIAFLFLVRRDLPLDFLWQSFFE 372
           P  SSS+     + R +  + + +  F G P++AFLFLVR+DLPLDFLW SFFE
Sbjct: 59  PSSSSSSSSSSSFYRPRSRLSRANLEFHGPPKLAFLFLVRQDLPLDFLWGSFFE 112


>ref|XP_002892665.1| hypothetical protein ARALYDRAFT_312224 [Arabidopsis lyrata subsp.
           lyrata] gi|297338507|gb|EFH68924.1| hypothetical protein
           ARALYDRAFT_312224 [Arabidopsis lyrata subsp. lyrata]
          Length = 383

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
 Frame = +1

Query: 106 PPVSSVPQNLWLIWKXXXXXXXXXXXXXXXRIQFYYDTPPQSSSARVYRRSQLPIWKDDE 285
           PP+S     +WL WK               RIQ  Y++     S     RSQ P+ K   
Sbjct: 11  PPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSDTTLPSPLSVARSQTPLHK--- 67

Query: 286 GFEGN-PRIAFLFLVRRDLPLDFLWQSFFE 372
            + G+ P++AFLFL RRDLPLDF+W  FF+
Sbjct: 68  -YSGDRPKLAFLFLARRDLPLDFMWDRFFK 96


>gb|AAC17624.1| Contains similarity to hypothetical protein gb|U95973 from A.
           thaliana [Arabidopsis thaliana]
          Length = 364

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
 Frame = +1

Query: 106 PPVSSVPQNLWLIWKXXXXXXXXXXXXXXXRIQFYYDTPPQSSSARVYRRSQLPIWKDDE 285
           PP+S     +WL WK               RIQ  Y++    S      RSQ P+ K   
Sbjct: 11  PPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSFTTLSFPLSVARSQTPLHK--- 67

Query: 286 GFEGN-PRIAFLFLVRRDLPLDFLWQSFFE 372
            + G+ P++AFLFL RRDLPLDF+W  FF+
Sbjct: 68  -YSGDRPKLAFLFLARRDLPLDFMWDRFFK 96


>ref|NP_172658.2| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family
           protein [Arabidopsis thaliana]
           gi|26450342|dbj|BAC42287.1| unknown protein [Arabidopsis
           thaliana] gi|28827514|gb|AAO50601.1| unknown protein
           [Arabidopsis thaliana] gi|332190698|gb|AEE28819.1|
           Core-2/I-branching
           beta-1,6-N-acetylglucosaminyltransferase family protein
           [Arabidopsis thaliana]
          Length = 383

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
 Frame = +1

Query: 106 PPVSSVPQNLWLIWKXXXXXXXXXXXXXXXRIQFYYDTPPQSSSARVYRRSQLPIWKDDE 285
           PP+S     +WL WK               RIQ  Y++    S      RSQ P+ K   
Sbjct: 11  PPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSFTTLSFPLSVARSQTPLHK--- 67

Query: 286 GFEGN-PRIAFLFLVRRDLPLDFLWQSFFE 372
            + G+ P++AFLFL RRDLPLDF+W  FF+
Sbjct: 68  -YSGDRPKLAFLFLARRDLPLDFMWDRFFK 96


>ref|XP_002264137.1| PREDICTED: uncharacterized protein LOC100262450 [Vitis vinifera]
           gi|302144098|emb|CBI23203.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/98 (38%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
 Frame = +1

Query: 94  MKRVPPVSSVPQNLWLIWKXXXXXXXXXXXXXXXRIQFYYDT-----PPQSSSARVYRRS 258
           M +  P  S+    W  WK               R+Q   +      PPQ    R YR S
Sbjct: 1   MTKKAPSFSIRHVFWFGWKLVILVSVALCVLALLRLQSNSELSSISLPPQGP--RFYRVS 58

Query: 259 QLPIWKDDEGFEGNPRIAFLFLVRRDLPLDFLWQSFFE 372
                     ++GNP+IAFLFLVRR LPLDFLW SFFE
Sbjct: 59  V---------YQGNPKIAFLFLVRRSLPLDFLWGSFFE 87


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