BLASTX nr result

ID: Atractylodes21_contig00024925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024925
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...    76   1e-13
emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]    75   4e-13
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]    74   1e-12
emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]    74   1e-12
emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]    74   1e-12

>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group] gi|78708691|gb|ABB47666.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score = 76.3 bits (186), Expect(3) = 1e-13
 Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
 Frame = +2

Query: 59  QSELPQIYIDFSDIIHTQFSNSIRVLRVDNQWSIMPHFFFNFFVSQ-----YSCPDTFQQ 223
           +S+L  IY  F+ +IHTQFS++IR+ R D+    M + F  F VSQ      SCP    Q
Sbjct: 422 RSQLISIYQSFAQMIHTQFSSAIRIFRSDSGGEYMSNAFREFLVSQGTLPQLSCPGAHAQ 481

Query: 224 NSRVERKHKHILDTISTLLISA*CPKCFW 310
           N   ERKH+HI++T  TLLI++  P  FW
Sbjct: 482 NGVAERKHRHIIETARTLLIASFVPAHFW 510



 Score = 23.5 bits (49), Expect(3) = 1e-13
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +1

Query: 1   FVIFLDDDHTLFTWIY 48
           +VIF+DD ++ +TWIY
Sbjct: 403 YVIFVDD-YSRYTWIY 417



 Score = 20.4 bits (41), Expect(3) = 1e-13
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 318 AAYAINLYPTPIHQNKASYKTLYG 389
           A Y IN+ P+   Q ++  + L+G
Sbjct: 517 AVYLINMQPSSSLQGRSPGEVLFG 540


>emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]
          Length = 1287

 Score = 75.5 bits (184), Expect(2) = 4e-13
 Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
 Frame = +2

Query: 44  FTHEKQSELPQIYIDFSDIIHTQFSNSIRVLRVDNQWSIMPHFFFNFF-----VSQYSCP 208
           F  + +SE+  IY +F+ +I TQFS  I+  R DN      H F         V   +CP
Sbjct: 541 FPMKSRSEILSIYSNFAKMIETQFSKRIKTFRSDNALEYTQHAFQALLHSYGTVHHLTCP 600

Query: 209 DTFQQNSRVERKHKHILDTISTLLISA*CPKCFWPSSCL 325
            T QQN RVERK +HILDT+  LL+SA  P  FW  + L
Sbjct: 601 GTSQQNGRVERKLRHILDTVRALLLSAKIPAPFWGEAAL 639



 Score = 23.5 bits (49), Expect(2) = 4e-13
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 318 AAYAINLYPTPIHQNKASYKTLYG 389
           A +AIN  P+ +  N+  Y+ L+G
Sbjct: 641 AVHAINRIPSAVIHNQTPYEHLFG 664


>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score = 73.9 bits (180), Expect(2) = 1e-12
 Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
 Frame = +2

Query: 44   FTHEKQSELPQIYIDFSDIIHTQFSNSIRVLRVDNQWSIMPHFFFNFF-----VSQYSCP 208
            F  + +SE+  IY +F+ +I TQFS  I+  R DN      H F         V   +CP
Sbjct: 1692 FPMKSRSEILSIYSNFAKMIETQFSKRIKTFRSDNALEYTQHAFQALLHSYGTVHHLTCP 1751

Query: 209  DTFQQNSRVERKHKHILDTISTLLISA*CPKCFWPSSCL 325
             T QQN R ERK +HILDT+  LL+SA  P  FW  + L
Sbjct: 1752 GTSQQNGRAERKLRHILDTVRALLLSAKIPAPFWGEAAL 1790



 Score = 23.9 bits (50), Expect(2) = 1e-12
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 318  AAYAINLYPTPIHQNKASYKTLYG 389
            A +AIN  P+ +  N+  Y+ L+G
Sbjct: 1792 AVHAINRIPSAVIHNQTPYERLFG 1815


>emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]
          Length = 2471

 Score = 73.6 bits (179), Expect(2) = 1e-12
 Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
 Frame = +2

Query: 44   FTHEKQSELPQIYIDFSDIIHTQFSNSIRVLRVDNQWSIMPHFFFNFF-----VSQYSCP 208
            F  + +SE+  IY +F+ +I TQFS  I+  R DN      H F         V   +CP
Sbjct: 848  FPMKSRSEILSIYNNFAKMIETQFSKRIKTFRSDNALEYTQHAFQALLHSYGTVHHLTCP 907

Query: 209  DTFQQNSRVERKHKHILDTISTLLISA*CPKCFWPSSCL 325
             T QQN R ERK +HILDT+  LL+SA  P  FW  + L
Sbjct: 908  GTSQQNGRAERKLRHILDTVRALLLSAKIPAPFWGEAAL 946



 Score = 23.9 bits (50), Expect(2) = 1e-12
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 318  AAYAINLYPTPIHQNKASYKTLYG 389
            A +AIN  P+ +  N+  Y+ L+G
Sbjct: 948  AVHAINRIPSAVIHNQTPYERLFG 971


>emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]
          Length = 1271

 Score = 73.6 bits (179), Expect(2) = 1e-12
 Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
 Frame = +2

Query: 44  FTHEKQSELPQIYIDFSDIIHTQFSNSIRVLRVDNQWSIMPHFFFNFF-----VSQYSCP 208
           F  + +SE+  IY +F+ ++ TQFS  I+  R DN      H F         +   +CP
Sbjct: 566 FPMKSRSEILSIYSNFAKMVETQFSKRIKTFRSDNALEYTQHAFQTLLHSYGTIHHLTCP 625

Query: 209 DTFQQNSRVERKHKHILDTISTLLISA*CPKCFWPSSCL 325
            T QQN R ERK +HILDT+  LL+SA  P  FW  + L
Sbjct: 626 GTSQQNGRAERKLRHILDTVRALLLSAKIPAPFWGEASL 664



 Score = 23.9 bits (50), Expect(2) = 1e-12
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 318 AAYAINLYPTPIHQNKASYKTLYG 389
           A +AIN  P+ +  N+  Y+ L+G
Sbjct: 666 AVHAINRIPSTVIHNQTPYERLFG 689


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