BLASTX nr result

ID: Atractylodes21_contig00024922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024922
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306374.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124
ref|XP_002526775.1| dihydroorotate dehydrogenase, putative [Rici...   438   e-120
ref|XP_002267743.1| PREDICTED: dihydroorotate dehydrogenase (qui...   433   e-119
ref|XP_003536739.1| PREDICTED: dihydroorotate dehydrogenase (qui...   432   e-119
ref|XP_003592737.1| Dihydroorotate dehydrogenase [Medicago trunc...   429   e-118

>ref|XP_002306374.1| predicted protein [Populus trichocarpa] gi|222855823|gb|EEE93370.1|
            predicted protein [Populus trichocarpa]
          Length = 457

 Score =  449 bits (1154), Expect = e-124
 Identities = 226/308 (73%), Positives = 253/308 (82%)
 Frame = +3

Query: 180  MTGRIAFRFMKECLKQKLKSVAAPIATPRHYCSSSSTAAAKPNPPHSSRKGRLLTGVTIG 359
            M  R + R +K+ L +++ S   P+++ RH+ SSSS+  A P  PH S+KGRLLTG TIG
Sbjct: 1    MASRASRRLLKDFLLKRVTST--PVSSVRHFSSSSSSETA-PKIPHFSKKGRLLTGATIG 57

Query: 360  LVIAGGAYASTVDEATFGGWLFSATKVVNPFFALLDPEVAHRLAVSAAARGWVPKEKRPD 539
            LVIAGGAY STVDEATF GWLF+ATK+VNPFFALLD E AH+LAVSAAARGWVP+EKRPD
Sbjct: 58   LVIAGGAYVSTVDEATFCGWLFNATKLVNPFFALLDAEFAHKLAVSAAARGWVPREKRPD 117

Query: 540  QPILGLEVWGRRFSNPIGLSAGFDKNXXXXXXXXXXXXXXXXXXSVTPIPQEGNPKPRIF 719
              +LGLEVWGR+FSNPIGL+AGFDKN                  SVTP+PQEGNPKPRIF
Sbjct: 118  PSVLGLEVWGRKFSNPIGLAAGFDKNAEAIDGLLGLGFGFVEVGSVTPVPQEGNPKPRIF 177

Query: 720  RLRDEGALINRCGFNSEGIVAVAKRLGAQHGKRKLDEXXXXXXXXXDEVKHGGKAGPGIL 899
            RLR EGA+INRCGFNSEGIVAVAKRLGAQHGKRKLDE         ++VKHGGKAGPGIL
Sbjct: 178  RLRQEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSSASSTSNNDVKHGGKAGPGIL 237

Query: 900  GVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINISSPNTPGLRQLQGRKQLKDLVKKVQ 1079
            GVN+GKNKTSEDAAADYVQGVH+LSQY+DYLVIN+SSPNTPGLR LQGRKQLKDLVKKVQ
Sbjct: 238  GVNLGKNKTSEDAAADYVQGVHSLSQYSDYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQ 297

Query: 1080 AARDEMQW 1103
            AARDEMQW
Sbjct: 298  AARDEMQW 305


>ref|XP_002526775.1| dihydroorotate dehydrogenase, putative [Ricinus communis]
            gi|223533878|gb|EEF35606.1| dihydroorotate dehydrogenase,
            putative [Ricinus communis]
          Length = 454

 Score =  438 bits (1127), Expect = e-120
 Identities = 225/308 (73%), Positives = 242/308 (78%)
 Frame = +3

Query: 180  MTGRIAFRFMKECLKQKLKSVAAPIATPRHYCSSSSTAAAKPNPPHSSRKGRLLTGVTIG 359
            M  R + R ++E L +K   V          C +SS     P  PH SRKGRLLTG TIG
Sbjct: 1    MAARASRRLLREFLYKKRTIVGGV------RCMNSSAPETLPKIPHFSRKGRLLTGATIG 54

Query: 360  LVIAGGAYASTVDEATFGGWLFSATKVVNPFFALLDPEVAHRLAVSAAARGWVPKEKRPD 539
            LVIAGGAY STVDEATF GWLF+ATK+VNPFFALLD E AH LAVSAAARGWVP+EKR D
Sbjct: 55   LVIAGGAYVSTVDEATFCGWLFNATKLVNPFFALLDAEDAHTLAVSAAARGWVPREKRSD 114

Query: 540  QPILGLEVWGRRFSNPIGLSAGFDKNXXXXXXXXXXXXXXXXXXSVTPIPQEGNPKPRIF 719
              ILGLEVWGR+FSNP+GL+AGFDKN                  SVTP+PQEGNPKPRIF
Sbjct: 115  PSILGLEVWGRKFSNPLGLAAGFDKNAEAVEGLLGLGFGSVEVGSVTPVPQEGNPKPRIF 174

Query: 720  RLRDEGALINRCGFNSEGIVAVAKRLGAQHGKRKLDEXXXXXXXXXDEVKHGGKAGPGIL 899
            RLR+EGA+INRCGFNSEGIVAVAKRLGAQHGKRKLDE         D+VKHGGKAGPGIL
Sbjct: 175  RLREEGAIINRCGFNSEGIVAVAKRLGAQHGKRKLDETSSTSSSPSDDVKHGGKAGPGIL 234

Query: 900  GVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINISSPNTPGLRQLQGRKQLKDLVKKVQ 1079
            GVN+GKNKTSEDAAADYVQGVHTLSQYADYLVIN+SSPNTPGLR LQGRKQLKDLVKKVQ
Sbjct: 235  GVNLGKNKTSEDAAADYVQGVHTLSQYADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQ 294

Query: 1080 AARDEMQW 1103
            AARDEMQW
Sbjct: 295  AARDEMQW 302


>ref|XP_002267743.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial-like
            [Vitis vinifera]
          Length = 460

 Score =  433 bits (1114), Expect = e-119
 Identities = 222/310 (71%), Positives = 244/310 (78%), Gaps = 2/310 (0%)
 Frame = +3

Query: 180  MTGRIAFRFMKECLKQKLKSVAAPIATPRHYCSSSSTAAAKPNP--PHSSRKGRLLTGVT 353
            M  R++ +  ++ L  K+KS        RH+ S++ T  A P    PHSS+KGRL TG  
Sbjct: 1    MAVRVSSKIWRDYLYNKVKS--GGFGATRHWSSAAQTPTAPPPKKIPHSSKKGRLFTGAA 58

Query: 354  IGLVIAGGAYASTVDEATFGGWLFSATKVVNPFFALLDPEVAHRLAVSAAARGWVPKEKR 533
            IGL+IAGGAY STVDEATF GWLFSATK+VNPFFALLD EVAHRLAVSAAARG VP+EKR
Sbjct: 59   IGLLIAGGAYVSTVDEATFCGWLFSATKLVNPFFALLDAEVAHRLAVSAAARGLVPREKR 118

Query: 534  PDQPILGLEVWGRRFSNPIGLSAGFDKNXXXXXXXXXXXXXXXXXXSVTPIPQEGNPKPR 713
            PD  ILGLEVWGR+FSNP+GL+AGFDKN                  SVTP+PQEGNPKPR
Sbjct: 119  PDPSILGLEVWGRKFSNPVGLAAGFDKNAEAVEGLLGLGFGFVEVGSVTPVPQEGNPKPR 178

Query: 714  IFRLRDEGALINRCGFNSEGIVAVAKRLGAQHGKRKLDEXXXXXXXXXDEVKHGGKAGPG 893
            IFRLR EGA+INRCGFNSEGI AVAKRLG QHGKRKL E         DEVKHGGKAGPG
Sbjct: 179  IFRLRHEGAIINRCGFNSEGIFAVAKRLGIQHGKRKLAETSSTSSSSKDEVKHGGKAGPG 238

Query: 894  ILGVNIGKNKTSEDAAADYVQGVHTLSQYADYLVINISSPNTPGLRQLQGRKQLKDLVKK 1073
            ILGVN+GKNKTSEDAAADYVQGVH+LSQYADYLVIN+SSPNTPGLR+LQGRKQLKDLVKK
Sbjct: 239  ILGVNLGKNKTSEDAAADYVQGVHSLSQYADYLVINVSSPNTPGLRKLQGRKQLKDLVKK 298

Query: 1074 VQAARDEMQW 1103
            VQ ARDEMQW
Sbjct: 299  VQGARDEMQW 308


>ref|XP_003536739.1| PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial-like
            [Glycine max]
          Length = 455

 Score =  432 bits (1111), Expect = e-119
 Identities = 217/277 (78%), Positives = 232/277 (83%)
 Frame = +3

Query: 273  CSSSSTAAAKPNPPHSSRKGRLLTGVTIGLVIAGGAYASTVDEATFGGWLFSATKVVNPF 452
            C SS+  +A P   H S+KGRLLTG TIGL+IAGGAY STVDEATF GWLFSATK+VNPF
Sbjct: 28   CFSSAPKSA-PKIGHYSKKGRLLTGATIGLLIAGGAYVSTVDEATFCGWLFSATKLVNPF 86

Query: 453  FALLDPEVAHRLAVSAAARGWVPKEKRPDQPILGLEVWGRRFSNPIGLSAGFDKNXXXXX 632
            FALLDPE AH L VSAAARGWVP+EKRPD  ILGLEVWGR+FSNP+GL+AGFDKN     
Sbjct: 87   FALLDPEFAHNLGVSAAARGWVPREKRPDPSILGLEVWGRKFSNPVGLAAGFDKNAEAVD 146

Query: 633  XXXXXXXXXXXXXSVTPIPQEGNPKPRIFRLRDEGALINRCGFNSEGIVAVAKRLGAQHG 812
                         SVTP+PQ+GNPKPRIFRLR EGA+INRCGFNSEGIVAVAKRLGAQHG
Sbjct: 147  GLLALGFGFVEVGSVTPVPQDGNPKPRIFRLRKEGAVINRCGFNSEGIVAVAKRLGAQHG 206

Query: 813  KRKLDEXXXXXXXXXDEVKHGGKAGPGILGVNIGKNKTSEDAAADYVQGVHTLSQYADYL 992
            KRKLDE         +EVKHGGKAGPGILGVN+GKNKTSEDAAADYVQGVHTLSQYADYL
Sbjct: 207  KRKLDETSSASPSSNNEVKHGGKAGPGILGVNLGKNKTSEDAAADYVQGVHTLSQYADYL 266

Query: 993  VINISSPNTPGLRQLQGRKQLKDLVKKVQAARDEMQW 1103
            VIN+SSPNTPGLR LQGRKQLKDLVKKVQAARDEMQW
Sbjct: 267  VINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQW 303


>ref|XP_003592737.1| Dihydroorotate dehydrogenase [Medicago truncatula]
            gi|355481785|gb|AES62988.1| Dihydroorotate dehydrogenase
            [Medicago truncatula]
          Length = 455

 Score =  429 bits (1103), Expect = e-118
 Identities = 217/290 (74%), Positives = 239/290 (82%)
 Frame = +3

Query: 234  KSVAAPIATPRHYCSSSSTAAAKPNPPHSSRKGRLLTGVTIGLVIAGGAYASTVDEATFG 413
            ++V   I T R + SS   A   P   + S+KGRLLTG T+GLVIAGGAY STVDEATF 
Sbjct: 17   RAVFNRIPTVRAFSSSPQNA---PKIGYYSKKGRLLTGATLGLVIAGGAYVSTVDEATFC 73

Query: 414  GWLFSATKVVNPFFALLDPEVAHRLAVSAAARGWVPKEKRPDQPILGLEVWGRRFSNPIG 593
            GWLFSATK+VNPFFAL+D EVAHRLAVSAAAR WVP+EKRPD PILGLEVWGR+FSNP+G
Sbjct: 74   GWLFSATKLVNPFFALMDAEVAHRLAVSAAARCWVPREKRPDPPILGLEVWGRKFSNPVG 133

Query: 594  LSAGFDKNXXXXXXXXXXXXXXXXXXSVTPIPQEGNPKPRIFRLRDEGALINRCGFNSEG 773
            L+AGFDKN                  SVTP+PQ+GNPKPR+FRLR+EGA+INRCGFNSEG
Sbjct: 134  LAAGFDKNAEAVDGLLGLGFGFVEVGSVTPVPQDGNPKPRMFRLRNEGAVINRCGFNSEG 193

Query: 774  IVAVAKRLGAQHGKRKLDEXXXXXXXXXDEVKHGGKAGPGILGVNIGKNKTSEDAAADYV 953
            IVAVAKRLGAQHGKRKLDE         +EVKHGGKAGPGILGVN+GKNKTSED+AADYV
Sbjct: 194  IVAVAKRLGAQHGKRKLDETSSTSTNSNNEVKHGGKAGPGILGVNLGKNKTSEDSAADYV 253

Query: 954  QGVHTLSQYADYLVINISSPNTPGLRQLQGRKQLKDLVKKVQAARDEMQW 1103
            QGVHTLSQ+ADYLVIN+SSPNTPGLR LQGRKQLKDLVKKVQAARDEMQW
Sbjct: 254  QGVHTLSQFADYLVINVSSPNTPGLRMLQGRKQLKDLVKKVQAARDEMQW 303


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