BLASTX nr result

ID: Atractylodes21_contig00024918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024918
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632114.1| PREDICTED: zinc finger CCCH domain-containin...   100   4e-19
emb|CAN74402.1| hypothetical protein VITISV_043632 [Vitis vinifera]   100   4e-19
gb|ADE74631.1| unknown [Vitis vinifera]                                89   9e-16
ref|XP_004172112.1| PREDICTED: zinc finger CCCH domain-containin...    87   3e-15
ref|XP_004149598.1| PREDICTED: zinc finger CCCH domain-containin...    87   3e-15

>ref|XP_003632114.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like [Vitis
            vinifera]
          Length = 725

 Score =  100 bits (248), Expect = 4e-19
 Identities = 90/293 (30%), Positives = 109/293 (37%), Gaps = 119/293 (40%)
 Frame = -1

Query: 718  PMLQLQGGNLQASRLRLSFNTRDTQAEELKLLLDLEMHQRQ------------------- 596
            P L L G NLQ SRLR S + RD   EE  +L D ++ Q+Q                   
Sbjct: 433  PTLHLPGSNLQTSRLRSSLSARDMLVEEFNVLQDFDVQQQQLLNDLSHFTQPNLSSASGN 492

Query: 595  -------------------------------QAAVYSPSHRPVVLNQ---------SYPM 536
                                            + ++SPSH+ VVLNQ             
Sbjct: 493  LSVRSKALTPSNLDELFSAEMSSPRYADHVAASTMFSPSHKSVVLNQFQHQQGMLSPIKT 552

Query: 535  NPYSPTGFDYN------GVSSPRIVSPRGIE------------------QSHLAPYSPH- 431
            N +SP   D+       GVSSP  +SPRGIE                  Q HL   S   
Sbjct: 553  NVFSPKNVDHPLLQASFGVSSPGRMSPRGIEPLSPLSSRFSSLAHREKQQQHLRSLSSRD 612

Query: 430  ---------------LSKWDSARGKVDWSIMN---GGGRRSQSTE-----PDVSWVQSLV 320
                            SKW+S  GK+DWS+        R++ S E     PD+SWVQSLV
Sbjct: 613  LGSNGAGIVNSPANSWSKWESPNGKIDWSVQGEELAWHRKTFSIEQNREGPDLSWVQSLV 672

Query: 319  KESPPPVTXXXXXXXXXXXEKTD------------HAALGGWLENMQLDQIVA 197
            KESPP +               D            HA LG WLE MQLDQIVA
Sbjct: 673  KESPPGIQETPTLPVSGMTVSADGSNSISRIDSIDHAVLGAWLEQMQLDQIVA 725


>emb|CAN74402.1| hypothetical protein VITISV_043632 [Vitis vinifera]
          Length = 718

 Score =  100 bits (248), Expect = 4e-19
 Identities = 90/293 (30%), Positives = 109/293 (37%), Gaps = 119/293 (40%)
 Frame = -1

Query: 718  PMLQLQGGNLQASRLRLSFNTRDTQAEELKLLLDLEMHQRQ------------------- 596
            P L L G NLQ SRLR S + RD   EE  +L D ++ Q+Q                   
Sbjct: 426  PTLHLPGSNLQTSRLRSSLSARDMLVEEFNVLQDFDVQQQQLLNDLSHFTQPNLSSASGN 485

Query: 595  -------------------------------QAAVYSPSHRPVVLNQ---------SYPM 536
                                            + ++SPSH+ VVLNQ             
Sbjct: 486  LSVRSKALTPSNLDELFSAEMSSPRYADHVAASTMFSPSHKSVVLNQFQHQQGMLSPIKT 545

Query: 535  NPYSPTGFDYN------GVSSPRIVSPRGIE------------------QSHLAPYSPH- 431
            N +SP   D+       GVSSP  +SPRGIE                  Q HL   S   
Sbjct: 546  NVFSPKNVDHPLLQASFGVSSPGRMSPRGIEPLSPLSSRFSSLAHREKQQQHLRSLSSRD 605

Query: 430  ---------------LSKWDSARGKVDWSIMN---GGGRRSQSTE-----PDVSWVQSLV 320
                            SKW+S  GK+DWS+        R++ S E     PD+SWVQSLV
Sbjct: 606  LGSNGAGIVNSPANSWSKWESPNGKIDWSVQGEELAWHRKTFSIEQNREGPDLSWVQSLV 665

Query: 319  KESPPPVTXXXXXXXXXXXEKTD------------HAALGGWLENMQLDQIVA 197
            KESPP +               D            HA LG WLE MQLDQIVA
Sbjct: 666  KESPPGIQETPTLPVSGMTVSADGSNSISRIDSIDHAVLGAWLEQMQLDQIVA 718


>gb|ADE74631.1| unknown [Vitis vinifera]
          Length = 740

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 85/305 (27%), Positives = 112/305 (36%), Gaps = 132/305 (43%)
 Frame = -1

Query: 718  PMLQLQGGNLQASRLRLSFNTRDTQAEELKLLLDLEMHQR-------------------- 599
            P L L G N Q+SRLR S N RD   E+  +LLD +  Q+                    
Sbjct: 438  PTLNLPGSNFQSSRLRSSLNARDIPPEDFNMLLDFDAQQQLLNDLSCFSQPRTNAASLSR 497

Query: 598  ---------------------------QQAAVYSPSHRPVVLNQSYPM----------NP 530
                                         +AV+SPSH+  +LNQ              N 
Sbjct: 498  SARSKTLTPSNLEELFSAEISSSPRYSDSSAVFSPSHKSAILNQFQQQQQSMLSPINTNV 557

Query: 529  YSPTGFDYN------GVSSPRIVSPRGIEQSHLAPYSPHLS------------------- 425
            +SP   ++       G+SSP  +SPR +E   ++P  P LS                   
Sbjct: 558  FSPKNVEHPLLQASFGISSPGRMSPRSMEP--ISPMGPRLSAIAQREKQHQQLRSLSSRD 615

Query: 424  ------------------KWDSARGKVDWSIMNGG--GRRSQST---------EPDVSWV 332
                              KW S  GK+DWS+ NG   GR  +S+         EPD+SWV
Sbjct: 616  LGSNNPASVVGSPVNSWSKWGSPTGKLDWSV-NGDEMGRLKRSSSFELGNNGEEPDLSWV 674

Query: 331  QSLVKESPP---------PVT------------XXXXXXXXXXXEKTDHAALGGWLENMQ 215
            QSLVKESPP         PV+                       +  DH+ +G WLE MQ
Sbjct: 675  QSLVKESPPEMMKEKLAAPVSASASSGEGLNSNSQIESNSNSQIDSVDHSVIGAWLEQMQ 734

Query: 214  LDQIV 200
            LDQ+V
Sbjct: 735  LDQLV 739


>ref|XP_004172112.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
            [Cucumis sativus]
          Length = 724

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 89/294 (30%), Positives = 107/294 (36%), Gaps = 121/294 (41%)
 Frame = -1

Query: 718  PMLQLQGGNLQASRLRLSFNTRDTQAEELKLLLDLEMHQR-------------------- 599
            P L L G NLQ+SRLR S N RD   E+L  L D E   R                    
Sbjct: 430  PTLHLPGSNLQSSRLRSSLNARDMPLEDLNALPDFENQPRILNDMNCFSQPRPSAVSVSR 489

Query: 598  ----------------------------QQAAVYSPSHRPVVLNQSY--------PMNP- 530
                                          A V+SP+ +  +LNQ          P+N  
Sbjct: 490  SGWTQTLTPNNLEELFSSEISLSPRFSDPAANVFSPTRKSTMLNQFQQQQQNMLSPINTS 549

Query: 529  -YSPTGFDYN------GVSSPRIVSPRGIE----------------QSHLAPYSPH---- 431
              SP   D++      GVSSP  +SPR  E                + HL   S      
Sbjct: 550  IMSPKNVDHHLLQASFGVSSPGRMSPRSTEPLSPMGSRFSAFVQREKQHLRTLSSRELGS 609

Query: 430  -------------LSKWDSARGKVDWSIMN---GGGRRSQS-------TEPDVSWVQSLV 320
                         L KW S  GKVDWS+     G  RRS S        EPD+SWVQSLV
Sbjct: 610  NIPSSLIGSPVNSLPKWGSPNGKVDWSVGKNELGQLRRSSSFEMGNNGEEPDLSWVQSLV 669

Query: 319  KESPPPV--------------TXXXXXXXXXXXEKTDHAALGGWLENMQLDQIV 200
            KESPP +              +           E TDH+ +G WLE MQLDQ+V
Sbjct: 670  KESPPEMLKEKLAVSGMGTAASGEGLTTSKSQLESTDHSVIGAWLEQMQLDQLV 723


>ref|XP_004149598.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
            [Cucumis sativus]
          Length = 724

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 89/294 (30%), Positives = 107/294 (36%), Gaps = 121/294 (41%)
 Frame = -1

Query: 718  PMLQLQGGNLQASRLRLSFNTRDTQAEELKLLLDLEMHQR-------------------- 599
            P L L G NLQ+SRLR S N RD   E+L  L D E   R                    
Sbjct: 430  PTLHLPGSNLQSSRLRSSLNARDMPLEDLNALPDFENQPRILNDMNCFSQPRPSAVSVSR 489

Query: 598  ----------------------------QQAAVYSPSHRPVVLNQSY--------PMNP- 530
                                          A V+SP+ +  +LNQ          P+N  
Sbjct: 490  SGWTQTLTPNNLEELFSSEISLSPRFSDPAANVFSPTRKSTMLNQFQQQQQNMLSPINTS 549

Query: 529  -YSPTGFDYN------GVSSPRIVSPRGIE----------------QSHLAPYSPH---- 431
              SP   D++      GVSSP  +SPR  E                + HL   S      
Sbjct: 550  IMSPKNVDHHLLQASFGVSSPGRMSPRSTEPLSPMGSRFSAFVQREKQHLRTLSSRELGS 609

Query: 430  -------------LSKWDSARGKVDWSIMN---GGGRRSQS-------TEPDVSWVQSLV 320
                         L KW S  GKVDWS+     G  RRS S        EPD+SWVQSLV
Sbjct: 610  NIPSSLIGSPVNSLPKWGSPNGKVDWSVGKNELGQLRRSSSFEMGNNGEEPDLSWVQSLV 669

Query: 319  KESPPPV--------------TXXXXXXXXXXXEKTDHAALGGWLENMQLDQIV 200
            KESPP +              +           E TDH+ +G WLE MQLDQ+V
Sbjct: 670  KESPPEMLKEKLAVSGMGTAASGEGLTTSKSQLESTDHSVIGAWLEQMQLDQLV 723


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