BLASTX nr result

ID: Atractylodes21_contig00024916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024916
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20821.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|XP_002281010.1| PREDICTED: endonuclease V-like [Vitis vinifera]   127   9e-28
ref|XP_003544632.1| PREDICTED: endonuclease V [Glycine max]           117   1e-24
ref|XP_002867312.1| endonuclease V family protein [Arabidopsis l...   117   1e-24
emb|CAB79833.1| putative protein [Arabidopsis thaliana]               116   2e-24

>emb|CBI20821.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  127 bits (319), Expect = 9e-28
 Identities = 62/104 (59%), Positives = 76/104 (73%), Gaps = 10/104 (9%)
 Frame = -1

Query: 391 QVPDEWLQAQDSLKKKLVTEDDYTWKL----------GDAEESCGVELLKYIGGVDISFS 242
           Q  + W+Q QDSLK++LVTEDD+TWKL          G  EE     +LKY+GGVD+SFS
Sbjct: 29  QFIENWIQVQDSLKRRLVTEDDFTWKLPKPTSTATVRGRIEEGDDKHVLKYVGGVDVSFS 88

Query: 241 KDDSSVACGTLVVLDFKTLDVVYEDSSIVKIDIPYVPGFLAFRE 110
           KDD SVACGT+VVLD  TL+VVY+D S+V++  PYVPGFLA RE
Sbjct: 89  KDDPSVACGTIVVLDLGTLEVVYDDYSVVRLQTPYVPGFLALRE 132


>ref|XP_002281010.1| PREDICTED: endonuclease V-like [Vitis vinifera]
          Length = 285

 Score =  127 bits (319), Expect = 9e-28
 Identities = 62/104 (59%), Positives = 76/104 (73%), Gaps = 10/104 (9%)
 Frame = -1

Query: 391 QVPDEWLQAQDSLKKKLVTEDDYTWKL----------GDAEESCGVELLKYIGGVDISFS 242
           Q  + W+Q QDSLK++LVTEDD+TWKL          G  EE     +LKY+GGVD+SFS
Sbjct: 29  QFIENWIQVQDSLKRRLVTEDDFTWKLPKPTSTATVRGRIEEGDDKHVLKYVGGVDVSFS 88

Query: 241 KDDSSVACGTLVVLDFKTLDVVYEDSSIVKIDIPYVPGFLAFRE 110
           KDD SVACGT+VVLD  TL+VVY+D S+V++  PYVPGFLA RE
Sbjct: 89  KDDPSVACGTIVVLDLGTLEVVYDDYSVVRLQTPYVPGFLALRE 132


>ref|XP_003544632.1| PREDICTED: endonuclease V [Glycine max]
          Length = 268

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/91 (63%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
 Frame = -1

Query: 376 WLQAQDSLKKKLVTEDDYTWKL--GDAEESCGVELLKYIGGVDISFSKDDSSVACGTLVV 203
           W+ AQ+ L++KL+TED + WKL  G  EE    E L+Y+GGVDISFSKDD S ACGTLVV
Sbjct: 25  WITAQNILREKLITEDCFAWKLQAGSKEE----EALRYVGGVDISFSKDDPSRACGTLVV 80

Query: 202 LDFKTLDVVYEDSSIVKIDIPYVPGFLAFRE 110
           LDF TL V+Y+D S+V + +PYVPGFLAFRE
Sbjct: 81  LDFHTLQVLYQDFSLVTLQVPYVPGFLAFRE 111


>ref|XP_002867312.1| endonuclease V family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313148|gb|EFH43571.1| endonuclease V family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 277

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/92 (58%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
 Frame = -1

Query: 382 DEWLQAQDSLKKKLVTEDDYTWKLGDAEE-SCGVELLKYIGGVDISFSKDDSSVACGTLV 206
           ++W++ QD LKKKL+  DD+TWKL  + E S G E+LKY+GGVD+SF K+DSSVAC  LV
Sbjct: 18  EKWIEEQDQLKKKLIAYDDFTWKLSSSMELSHGSEILKYVGGVDMSFCKEDSSVACACLV 77

Query: 205 VLDFKTLDVVYEDSSIVKIDIPYVPGFLAFRE 110
           VL+  +L VV+ D S++++ +PYVPGFLAFRE
Sbjct: 78  VLELPSLRVVHHDFSLLRLHVPYVPGFLAFRE 109


>emb|CAB79833.1| putative protein [Arabidopsis thaliana]
          Length = 325

 Score =  116 bits (290), Expect = 2e-24
 Identities = 54/92 (58%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
 Frame = -1

Query: 382 DEWLQAQDSLKKKLVTEDDYTWKLGDAEE-SCGVELLKYIGGVDISFSKDDSSVACGTLV 206
           ++W + QD LKKKL+  DD+TWKL  + E S G E+LKY+GGVD+SF K+DSSVAC  LV
Sbjct: 18  EKWTEEQDELKKKLIAYDDFTWKLSSSTELSQGSEILKYVGGVDMSFCKEDSSVACACLV 77

Query: 205 VLDFKTLDVVYEDSSIVKIDIPYVPGFLAFRE 110
           VL+  +L VV+ D S++++ +PYVPGFLAFRE
Sbjct: 78  VLELPSLRVVHHDFSLLRLHVPYVPGFLAFRE 109


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