BLASTX nr result

ID: Atractylodes21_contig00024892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024892
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301004.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_004140332.1| PREDICTED: cold shock domain-containing prot...   103   2e-20
ref|XP_002285837.1| PREDICTED: glycine-rich protein 2b-like [Vit...   102   4e-20
emb|CAN68380.1| hypothetical protein VITISV_018906 [Vitis vinifera]   102   4e-20
ref|XP_002307424.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20

>ref|XP_002301004.1| predicted protein [Populus trichocarpa] gi|222842730|gb|EEE80277.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/77 (67%), Positives = 59/77 (76%)
 Frame = -3

Query: 274 MAEIKRYEGTVRWFSGQKGFGFIAPADDSDDIFVHQSEIKAEGFRFLRDGQRVEFSVDSG 95
           MAE KR  GTV+WFS QKGFGFIAP D  +D+FVHQ+ I+++GFR L DGQ VEFSV SG
Sbjct: 1   MAETKRSTGTVKWFSAQKGFGFIAPDDGGEDLFVHQTSIQSDGFRTLSDGQPVEFSVGSG 60

Query: 94  GDGRKKAVDVVGFRRDR 44
            DGR KA DVVG  R R
Sbjct: 61  EDGRAKAADVVGASRSR 77


>ref|XP_004140332.1| PREDICTED: cold shock domain-containing protein 4-like [Cucumis
           sativus]
          Length = 181

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/82 (62%), Positives = 59/82 (71%)
 Frame = -3

Query: 274 MAEIKRYEGTVRWFSGQKGFGFIAPADDSDDIFVHQSEIKAEGFRFLRDGQRVEFSVDSG 95
           MAE+KR  GTVRWFS QKGFGFIAP D +DD+FVHQ+ I++EGFR L DGQ VEF++D  
Sbjct: 1   MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYD 60

Query: 94  GDGRKKAVDVVGFRRDRTYQPG 29
            D R KAVDV    R   Y  G
Sbjct: 61  QDQRAKAVDVTVIDRSTRYGGG 82


>ref|XP_002285837.1| PREDICTED: glycine-rich protein 2b-like [Vitis vinifera]
          Length = 228

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/74 (63%), Positives = 58/74 (78%)
 Frame = -3

Query: 274 MAEIKRYEGTVRWFSGQKGFGFIAPADDSDDIFVHQSEIKAEGFRFLRDGQRVEFSVDSG 95
           MAE KR  GTV+WFSGQKGFGFIAP D  +D+FVHQ+ I+++GFR L +G+ VEF+VD G
Sbjct: 1   MAESKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHG 60

Query: 94  GDGRKKAVDVVGFR 53
            DGR KAV+V   R
Sbjct: 61  EDGRTKAVEVTAVR 74


>emb|CAN68380.1| hypothetical protein VITISV_018906 [Vitis vinifera]
          Length = 189

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/74 (63%), Positives = 58/74 (78%)
 Frame = -3

Query: 274 MAEIKRYEGTVRWFSGQKGFGFIAPADDSDDIFVHQSEIKAEGFRFLRDGQRVEFSVDSG 95
           MAE KR  GTV+WFSGQKGFGFIAP D  +D+FVHQ+ I+++GFR L +G+ VEF+VD G
Sbjct: 1   MAESKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHG 60

Query: 94  GDGRKKAVDVVGFR 53
            DGR KAV+V   R
Sbjct: 61  EDGRTKAVEVTAVR 74


>ref|XP_002307424.1| predicted protein [Populus trichocarpa] gi|222856873|gb|EEE94420.1|
           predicted protein [Populus trichocarpa]
          Length = 64

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/64 (73%), Positives = 54/64 (84%)
 Frame = -3

Query: 250 GTVRWFSGQKGFGFIAPADDSDDIFVHQSEIKAEGFRFLRDGQRVEFSVDSGGDGRKKAV 71
           GTV+WFS QKGFGFIAP D  +D+FVHQ+ I+++GFR L DGQ VEFSVDSG DGR KAV
Sbjct: 1   GTVKWFSAQKGFGFIAPDDGGEDLFVHQTSIQSDGFRTLSDGQPVEFSVDSGEDGRTKAV 60

Query: 70  DVVG 59
           DVVG
Sbjct: 61  DVVG 64


Top