BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024890
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068729.1| putative reverse transcriptase [Soybean chlorot...   266   2e-69
gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]   213   2e-53
ref|NP_861410.1| putative multifunctional pol protein [Cestrum y...   213   2e-53
gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]   213   4e-53
gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]   213   4e-53

>ref|NP_068729.1| putative reverse transcriptase [Soybean chlorotic mottle virus]
           gi|18266821|sp|P15629.2|POL_SOCMV RecName:
           Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|11322953|emb|CAC16945.1| putative
           reverse transcriptase [Soybean chlorotic mottle virus]
          Length = 692

 Score =  266 bits (681), Expect = 2e-69
 Identities = 143/238 (60%), Positives = 168/238 (70%), Gaps = 6/238 (2%)
 Frame = -2

Query: 696 FSIPTVYQHDSRIDLII*NNFLKLYQPFVQTNNDISI------HTLKGKRITTPILKTDN 535
           F IP +Y HDS +DLII NNFLKLYQPF+Q    I +      +  + + I+T IL  + 
Sbjct: 87  FLIPIIYLHDSGLDLIIGNNFLKLYQPFIQRLETIELRWKNLNNPKESQMISTKILTKNE 146

Query: 534 LIKLLQQHTRFELQIVLIATQKFLEEQLDKVCSXXXXXXXXXXXXXXXXXXXXDPRAEIN 355
           ++KL  +     L+  L    K +EEQL++VCS                    DP  EIN
Sbjct: 147 VLKLSFEKIHICLEKYLFF--KTIEEQLEEVCSEHPLDETKNKNGLLIEIRLKDPLQEIN 204

Query: 354 VPNRIPYSIKDVNEFKEECSQLLEKGIIRESQSPHSAPAFYVENKNEIKRGKRRMVINYK 175
           V NRIPY+I+DV EFKEEC  LL+KG+IRESQSPHSAPAFYVEN NEIKRGKRRMVINYK
Sbjct: 205 VTNRIPYTIRDVQEFKEECEDLLKKGLIRESQSPHSAPAFYVENHNEIKRGKRRMVINYK 264

Query: 174 KMNEATIGDPYKLPRKDYILEKLKGNTHFSTFDAKSGYWQLRLDENTKPLTAFSCPPQ 1
           KMNEATIGD YKLPRKD+ILEK+KG+  FS+ DAKSGY+QLRL ENTKPLTAFSCPPQ
Sbjct: 265 KMNEATIGDSYKLPRKDFILEKIKGSLWFSSLDAKSGYYQLRLHENTKPLTAFSCPPQ 322


>gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 680

 Score =  213 bits (543), Expect = 2e-53
 Identities = 121/239 (50%), Positives = 147/239 (61%), Gaps = 7/239 (2%)
 Frame = -2

Query: 696 FSIPTVYQHDSRIDLII*NNFLKLYQPFVQTNNDISIH-----TLKGKRITTPILKTDNL 532
           F +PT+YQ DS + +II NNFL+LY PF Q  + I++        K + I  PI  +  L
Sbjct: 98  FLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCPKMINQKQEVIKIPIHHSSQL 157

Query: 531 IK--LLQQHTRFELQIVLIATQKFLEEQLDKVCSXXXXXXXXXXXXXXXXXXXXDPRAEI 358
           IK  LL   T  E Q+++    K L+E+                          DP AEI
Sbjct: 158 IKAKLLNLVTNLEEQLLMDQVNKILQERFS-----LDLLGEKNKNKELIEIKLKDPNAEI 212

Query: 357 NVPNRIPYSIKDVNEFKEECSQLLEKGIIRESQSPHSAPAFYVENKNEIKRGKRRMVINY 178
            VPN IPY+ +D+ EFKE+   LL KG+IR S+SPHSAPAFYVEN +EIKR KRR+VINY
Sbjct: 213 FVPNNIPYTQRDIEEFKEDMEDLLNKGLIRPSKSPHSAPAFYVENHSEIKRAKRRIVINY 272

Query: 177 KKMNEATIGDPYKLPRKDYILEKLKGNTHFSTFDAKSGYWQLRLDENTKPLTAFSCPPQ 1
           K MNEATIG P  LPR DYI+ +LKG   FST D KS YWQLRL E +KPLTAFS PPQ
Sbjct: 273 KAMNEATIGTPKTLPRSDYIMNRLKGKIWFSTLDVKSAYWQLRLTEESKPLTAFSYPPQ 331


>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
           virus] gi|75559686|sp|Q7TD08.1|POL_CYLCV RecName:
           Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|32305282|gb|AAP78924.1| putative
           multifunctional pol protein [Cestrum yellow leaf curling
           virus]
          Length = 643

 Score =  213 bits (543), Expect = 2e-53
 Identities = 120/246 (48%), Positives = 148/246 (60%), Gaps = 14/246 (5%)
 Frame = -2

Query: 696 FSIPTVYQHDSRIDLII*NNFLKLYQPFVQTNNDISIHTLKGKRITTP----ILKTDNLI 529
           F   TV Q  S +D +I NNFL+LYQPF+Q  N I +     K I  P     +      
Sbjct: 77  FVAATVCQKSSGMDFVIGNNFLRLYQPFIQGLNYIKLRAPLDKDINQPSKMIYIPVTTPS 136

Query: 528 KLLQQHTRFELQIVLIAT----------QKFLEEQLDKVCSXXXXXXXXXXXXXXXXXXX 379
           K+LQ     +LQ +L             +  +   L++VC                    
Sbjct: 137 KILQFAILEKLQDILFELHVQENSKTPLELKVSSTLEEVCDENPLDVKNTNTELVKIELI 196

Query: 378 XDPRAEINVPNRIPYSIKDVNEFKEECSQLLEKGIIRESQSPHSAPAFYVENKNEIKRGK 199
             P  E+NVPN IPYS++D+NEF +EC+ L+ KGII ES+SPHSAPAFYVEN NEIKR K
Sbjct: 197 N-PEKEVNVPNNIPYSLRDINEFSQECADLVRKGIIEESKSPHSAPAFYVENHNEIKRKK 255

Query: 198 RRMVINYKKMNEATIGDPYKLPRKDYILEKLKGNTHFSTFDAKSGYWQLRLDENTKPLTA 19
           RRMVINYK +N+ATIG+ +KLPR D IL K+KG+  FST DAKSGYWQLRL   +KPLTA
Sbjct: 256 RRMVINYKALNKATIGNAHKLPRIDSILTKVKGSNWFSTLDAKSGYWQLRLHPQSKPLTA 315

Query: 18  FSCPPQ 1
           FSCPPQ
Sbjct: 316 FSCPPQ 321


>gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score =  213 bits (541), Expect = 4e-53
 Identities = 120/239 (50%), Positives = 147/239 (61%), Gaps = 7/239 (2%)
 Frame = -2

Query: 696 FSIPTVYQHDSRIDLII*NNFLKLYQPFVQTNNDISIH-----TLKGKRITTPILKTDNL 532
           F +PT+YQ DS + +II NNFL+LY PF Q  + I++        K + I  PI  +  L
Sbjct: 75  FLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCPKMINQKQEVIKIPIHHSSQL 134

Query: 531 IK--LLQQHTRFELQIVLIATQKFLEEQLDKVCSXXXXXXXXXXXXXXXXXXXXDPRAEI 358
           IK  LL   T  E Q+++    K L+E+                          DP AEI
Sbjct: 135 IKAKLLNLVTNIEEQLLMEQVNKILQERFS-----LDLLGEKNKNKELIEIKLKDPNAEI 189

Query: 357 NVPNRIPYSIKDVNEFKEECSQLLEKGIIRESQSPHSAPAFYVENKNEIKRGKRRMVINY 178
            VPN IPY+ +D+ EFKE+   L+ KG+IR S+SPHSAPAFYVEN +EIKR KRR+VINY
Sbjct: 190 FVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPHSAPAFYVENHSEIKRAKRRIVINY 249

Query: 177 KKMNEATIGDPYKLPRKDYILEKLKGNTHFSTFDAKSGYWQLRLDENTKPLTAFSCPPQ 1
           K MNEATIG P  LPR DYI+ +LKG   FST D KS YWQLRL E +KPLTAFS PPQ
Sbjct: 250 KAMNEATIGTPKTLPRSDYIMNRLKGKIWFSTLDVKSAYWQLRLTEESKPLTAFSYPPQ 308


>gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 667

 Score =  213 bits (541), Expect = 4e-53
 Identities = 120/239 (50%), Positives = 147/239 (61%), Gaps = 7/239 (2%)
 Frame = -2

Query: 696 FSIPTVYQHDSRIDLII*NNFLKLYQPFVQTNNDISIH-----TLKGKRITTPILKTDNL 532
           F +PT+YQ DS + +II NNFL+LY PF Q  + I++        K + I  PI  +  L
Sbjct: 85  FLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCPKMINQKQEVIKIPIHHSSQL 144

Query: 531 IK--LLQQHTRFELQIVLIATQKFLEEQLDKVCSXXXXXXXXXXXXXXXXXXXXDPRAEI 358
           IK  LL   T  E Q+++    K L+E+                          DP AEI
Sbjct: 145 IKAKLLNLVTNIEEQLLMEQVNKILQERFS-----LDLLGEKNKNKELIEIKLKDPNAEI 199

Query: 357 NVPNRIPYSIKDVNEFKEECSQLLEKGIIRESQSPHSAPAFYVENKNEIKRGKRRMVINY 178
            VPN IPY+ +D+ EFKE+   L+ KG+IR S+SPHSAPAFYVEN +EIKR KRR+VINY
Sbjct: 200 FVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPHSAPAFYVENHSEIKRAKRRIVINY 259

Query: 177 KKMNEATIGDPYKLPRKDYILEKLKGNTHFSTFDAKSGYWQLRLDENTKPLTAFSCPPQ 1
           K MNEATIG P  LPR DYI+ +LKG   FST D KS YWQLRL E +KPLTAFS PPQ
Sbjct: 260 KAMNEATIGTPKTLPRSDYIMNRLKGKIWFSTLDVKSAYWQLRLTEESKPLTAFSYPPQ 318