BLASTX nr result

ID: Atractylodes21_contig00024874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024874
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat...   129   2e-28
emb|CBI15198.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
ref|XP_002303975.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19

>ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74400-like [Vitis vinifera]
          Length = 482

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/93 (66%), Positives = 79/93 (84%)
 Frame = -2

Query: 281 ADARQVFEEIPTKNVVCWTVLISAYVDNQKPNAALKLFTEMQMDNVEPDQVTLTVALSAC 102
           ADA  +F+EIP+KN++ WT +ISAYVDNQ+PN AL+LF +MQMD+V+PD VT+TVALSAC
Sbjct: 122 ADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSAC 181

Query: 101 ADLGALDVGKWIHNYIRRSKKLDKDLSLYNALL 3
           ADLGALD+G+WIH YIR  + LD DL L N+L+
Sbjct: 182 ADLGALDMGEWIHAYIRH-RGLDTDLCLNNSLI 213


>emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/93 (66%), Positives = 79/93 (84%)
 Frame = -2

Query: 281 ADARQVFEEIPTKNVVCWTVLISAYVDNQKPNAALKLFTEMQMDNVEPDQVTLTVALSAC 102
           ADA  +F+EIP+KN++ WT +ISAYVDNQ+PN AL+LF +MQMD+V+PD VT+TVALSAC
Sbjct: 683 ADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSAC 742

Query: 101 ADLGALDVGKWIHNYIRRSKKLDKDLSLYNALL 3
           ADLGALD+G+WIH YIR  + LD DL L N+L+
Sbjct: 743 ADLGALDMGEWIHAYIRH-RGLDTDLCLNNSLI 774


>ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
           gi|449493602|ref|XP_004159370.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 548

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/91 (51%), Positives = 69/91 (75%)
 Frame = -2

Query: 275 ARQVFEEIPTKNVVCWTVLISAYVDNQKPNAALKLFTEMQMDNVEPDQVTLTVALSACAD 96
           AR+VF E+P +NV+ WT LI+ Y    +P+ A++LF +MQ++ VEPD++ +   LSACAD
Sbjct: 207 ARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACAD 266

Query: 95  LGALDVGKWIHNYIRRSKKLDKDLSLYNALL 3
           LGAL++G+WIHNYI +   L + +SLYNAL+
Sbjct: 267 LGALELGEWIHNYIEK-HGLCRIVSLYNALI 296



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/91 (28%), Positives = 52/91 (57%)
 Frame = -2

Query: 275 ARQVFEEIPTKNVVCWTVLISAYVDNQKPNAALKLFTEMQMDNVEPDQVTLTVALSACAD 96
           A +VFE +  K+V+ W+ +I+A   +     A+ +F  M+   V P++VT    LSAC+ 
Sbjct: 308 ALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSH 367

Query: 95  LGALDVGKWIHNYIRRSKKLDKDLSLYNALL 3
           +G +DVG++  + ++   K++  +  Y  ++
Sbjct: 368 VGMVDVGRYYFDQMQSMYKIEPKIEHYGCMI 398


>ref|XP_002303975.1| predicted protein [Populus trichocarpa] gi|222841407|gb|EEE78954.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 44/92 (47%), Positives = 66/92 (71%)
 Frame = -2

Query: 278 DARQVFEEIPTKNVVCWTVLISAYVDNQKPNAALKLFTEMQMDNVEPDQVTLTVALSACA 99
           +AR +FE +P +NV+ WT LI+ Y    +P+ A+ LF  MQ++NVEPD++ + VAL+ACA
Sbjct: 166 NARDLFERMPQRNVISWTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACA 225

Query: 98  DLGALDVGKWIHNYIRRSKKLDKDLSLYNALL 3
            LGAL++G+WI +YI R   L  ++ L NAL+
Sbjct: 226 RLGALELGEWIRHYIDRLGLLTTNIPLNNALI 257



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/91 (27%), Positives = 48/91 (52%)
 Frame = -2

Query: 275 ARQVFEEIPTKNVVCWTVLISAYVDNQKPNAALKLFTEMQMDNVEPDQVTLTVALSACAD 96
           A QVFE +  K ++ WT +I+    +     AL++F+ M+   V+P+ +T    LSAC+ 
Sbjct: 269 ALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMFSRMERARVKPNDITFIAILSACSH 328

Query: 95  LGALDVGKWIHNYIRRSKKLDKDLSLYNALL 3
           +G +  G+W  N +     ++  +  Y  ++
Sbjct: 329 VGLVQTGRWYFNRMISRYGIEPKIEHYGCMI 359


>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
           [Vitis vinifera]
          Length = 576

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/92 (47%), Positives = 65/92 (70%)
 Frame = -2

Query: 278 DARQVFEEIPTKNVVCWTVLISAYVDNQKPNAALKLFTEMQMDNVEPDQVTLTVALSACA 99
           +AR +FE +P +NV+ WT +I+ Y    +PN A+ +F  MQ++ VEPD++ +  ALSACA
Sbjct: 223 NARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACA 282

Query: 98  DLGALDVGKWIHNYIRRSKKLDKDLSLYNALL 3
            LGAL++G+WIHNYI +   L K + L NAL+
Sbjct: 283 HLGALELGEWIHNYIDK-HGLSKIVPLNNALI 313