BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024841
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containi...   379   e-103
ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containi...   350   5e-94
ref|XP_002513638.1| pentatricopeptide repeat-containing protein,...   347   3e-93
ref|XP_002327501.1| predicted protein [Populus trichocarpa] gi|2...   336   7e-90
ref|NP_567622.1| pentatricopeptide repeat-containing protein [Ar...   328   1e-87

>ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190
            [Vitis vinifera] gi|302143769|emb|CBI22630.3| unnamed
            protein product [Vitis vinifera]
          Length = 295

 Score =  379 bits (974), Expect = e-103
 Identities = 194/286 (67%), Positives = 222/286 (77%), Gaps = 14/286 (4%)
 Frame = -2

Query: 1010 MLSLRYYSPPDFIGRLQFLEFPKKVSNCVVCAAKGPRPRYPRVWKTRTKVGTVSKSLKLV 831
            ML LRY SP     RL  +E PK   + VVC AKGPRPRYPRVWKTR ++GT+SKS KLV
Sbjct: 1    MLCLRY-SPATITRRLDAVEIPKNPRSIVVCGAKGPRPRYPRVWKTRQRIGTISKSAKLV 59

Query: 830  ECIKGLSNVKEEVYGALDSFIAWDLEFPLITVKKALKSLEHEKEWKRIIQVTKWMLSKGQ 651
            +CIKGLSNVKEEVYGALDSFIAW+LEFPLITVKKALK+LE +KEWKRIIQVTKWMLSKGQ
Sbjct: 60   DCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEDQKEWKRIIQVTKWMLSKGQ 119

Query: 650  GRTMGSYYLLLYALAEDGRIDEAEELWTRLFSDNLESMPRIFFDRMISIYYRRQMHDKMF 471
            GRTMGSY+ LL ALAEDGR+DEAEELWT+LFS+NLES+PR+F+D+MISIYYRR MH+KMF
Sbjct: 120  GRTMGSYFTLLNALAEDGRLDEAEELWTKLFSENLESLPRVFYDKMISIYYRRDMHEKMF 179

Query: 470  EVFADMEELGIRPTVSIVNMVGDVFQKLGMLDXXXXXXXXXXXXKWEYRYIKGKRVKIRS 291
            E+FADMEELGIRP  SIV MVGDVFQKLGMLD            KWEYRYIKGKRV+IR+
Sbjct: 180  EIFADMEELGIRPNTSIVKMVGDVFQKLGMLDKYEKLQKKYPPPKWEYRYIKGKRVRIRA 239

Query: 290  Q-----------NLKDPENATKEIN---EFGNETNRDEESNSDELE 195
            +              DP  A  EIN   E  NE + + +S+ D+ +
Sbjct: 240  KLTGESDDPGEAESDDPGEAVNEINDKTENSNEMHDEADSSVDDAD 285


>ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190-like
            [Cucumis sativus]
          Length = 331

 Score =  350 bits (897), Expect = 5e-94
 Identities = 174/274 (63%), Positives = 218/274 (79%)
 Frame = -2

Query: 1013 RMLSLRYYSPPDFIGRLQFLEFPKKVSNCVVCAAKGPRPRYPRVWKTRTKVGTVSKSLKL 834
            RML+L  Y+ P    R++ + F    S+ VVCAAKGPRPRYPRVWKT+ ++GT+SK+ KL
Sbjct: 18   RMLTL-VYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKL 76

Query: 833  VECIKGLSNVKEEVYGALDSFIAWDLEFPLITVKKALKSLEHEKEWKRIIQVTKWMLSKG 654
            V+C+KGLSNVKEEVYGALDSFIAW+LEFPLITVKKALK+LE+++EWKRIIQ+TKWMLSKG
Sbjct: 77   VDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKG 136

Query: 653  QGRTMGSYYLLLYALAEDGRIDEAEELWTRLFSDNLESMPRIFFDRMISIYYRRQMHDKM 474
            QGRTMGSY+ LL ALAEDGR+DEAEELW +LFS +LES+PRIFF +MIS+YY + MHDK+
Sbjct: 137  QGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESIPRIFFHKMISLYYDQAMHDKL 196

Query: 473  FEVFADMEELGIRPTVSIVNMVGDVFQKLGMLDXXXXXXXXXXXXKWEYRYIKGKRVKIR 294
            FEVFADMEELG++P ++IV  VG+VFQ+LGMLD            KWEYRYIKGKRVKIR
Sbjct: 197  FEVFADMEELGVQPNMAIVTKVGNVFQELGMLDKYKKLMKKYPPPKWEYRYIKGKRVKIR 256

Query: 293  SQNLKDPENATKEINEFGNETNRDEESNSDELEV 192
            ++ L +  N+   ++E   +      ++ DE E+
Sbjct: 257  AKYLSENGNSNNGLSEHA-KMEHSSTNSIDEAEI 289


>ref|XP_002513638.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547546|gb|EEF49041.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 359

 Score =  347 bits (890), Expect = 3e-93
 Identities = 171/268 (63%), Positives = 212/268 (79%), Gaps = 6/268 (2%)
 Frame = -2

Query: 968 RLQFLEFPKKVSNCVVCAAKGPRPRYPRVWKTRTKVGTVSKSLKLVECIKGLSNVKEEVY 789
           R + ++F K  S+ VV A KG RPR PRVWKT+ ++GT+SKS KLVECIKGLSNVKEEVY
Sbjct: 48  RFEVIKFSKSTSS-VVSALKGARPRAPRVWKTKPRIGTISKSAKLVECIKGLSNVKEEVY 106

Query: 788 GALDSFIAWDLEFPLITVKKALKSLEHEKEWKRIIQVTKWMLSKGQGRTMGSYYLLLYAL 609
           GALDS IAW+LEFPLI VKKALK+LE+E+EWKRIIQV KWMLSKGQGRTMG+Y+ LL AL
Sbjct: 107 GALDSLIAWELEFPLIAVKKALKTLENEQEWKRIIQVIKWMLSKGQGRTMGTYFTLLNAL 166

Query: 608 AEDGRIDEAEELWTRLFSDNLESMPRIFFDRMISIYYRRQMHDKMFEVFADMEELGIRPT 429
           AED R+DEAEELWT+LFSDNLE  PR FFD+MISIYY+R+MH+KMFE+FADMEELG+RP+
Sbjct: 167 AEDERLDEAEELWTKLFSDNLEGTPRNFFDKMISIYYKREMHEKMFEIFADMEELGVRPS 226

Query: 428 VSIVNMVGDVFQKLGMLDXXXXXXXXXXXXKWEYRYIKGKRVKIRSQNLKDPENATKEIN 249
           VSIVNM+G VFQKLGMLD            KWEYRYIKGKRV++R++ + +   A + +N
Sbjct: 227 VSIVNMMGSVFQKLGMLDKYRKLKKKYPPPKWEYRYIKGKRVRLRAKQVNEFLGANESVN 286

Query: 248 E------FGNETNRDEESNSDELEVDQN 183
           +        N+ N ++ +  +E  V+++
Sbjct: 287 QNAETPYISNKLNEEDNTKLNEANVEED 314


>ref|XP_002327501.1| predicted protein [Populus trichocarpa] gi|222836055|gb|EEE74476.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  336 bits (861), Expect = 7e-90
 Identities = 158/225 (70%), Positives = 192/225 (85%)
 Frame = -2

Query: 923 VCAAKGPRPRYPRVWKTRTKVGTVSKSLKLVECIKGLSNVKEEVYGALDSFIAWDLEFPL 744
           VCAAKGPRPRYPRVWKT+ ++GT+SKS KLV+CIKGLSNVKEEVYGALDSF+AW+LEFPL
Sbjct: 1   VCAAKGPRPRYPRVWKTKRRIGTISKSAKLVDCIKGLSNVKEEVYGALDSFVAWELEFPL 60

Query: 743 ITVKKALKSLEHEKEWKRIIQVTKWMLSKGQGRTMGSYYLLLYALAEDGRIDEAEELWTR 564
           I VKKAL++LE ++EWKRIIQVTKWMLSKGQGRTMG+Y+ L+ ALAEDGR+DE EELWT+
Sbjct: 61  IAVKKALRALEEQQEWKRIIQVTKWMLSKGQGRTMGTYFTLMNALAEDGRLDEVEELWTK 120

Query: 563 LFSDNLESMPRIFFDRMISIYYRRQMHDKMFEVFADMEELGIRPTVSIVNMVGDVFQKLG 384
           LFS  LE  PR+ FD+MISIYY+R MHD++FE+FADMEELG+RP+VSIVNMVG+VFQ+LG
Sbjct: 121 LFSQYLEGTPRMMFDKMISIYYKRDMHDQIFEIFADMEELGLRPSVSIVNMVGNVFQRLG 180

Query: 383 MLDXXXXXXXXXXXXKWEYRYIKGKRVKIRSQNLKDPENATKEIN 249
           M+D            KW YRYIKGKRV++R++N    +N   ++N
Sbjct: 181 MMDKYEKLKKKYPPPKWIYRYIKGKRVRVRAKN----DNEAGDVN 221


>ref|NP_567622.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75246109|sp|Q8LG95.1|PP332_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g21190; AltName: Full=Protein EMBRYO DEFECTIVE 1417
            gi|21618230|gb|AAM67280.1| unknown [Arabidopsis thaliana]
            gi|51969238|dbj|BAD43311.1| putative protein [Arabidopsis
            thaliana] gi|51971351|dbj|BAD44340.1| putative protein
            [Arabidopsis thaliana] gi|51971365|dbj|BAD44347.1|
            putative protein [Arabidopsis thaliana]
            gi|332659017|gb|AEE84417.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 307

 Score =  328 bits (842), Expect = 1e-87
 Identities = 165/282 (58%), Positives = 208/282 (73%), Gaps = 6/282 (2%)
 Frame = -2

Query: 1010 MLSLRYYSPPDFIGRLQFLE--FPKKVSNCVVCAAKGPRPRYPRVWKTRTKVGTVSKSLK 837
            MLSLRY  P   +   +     F KK +N VVCAA+GPRPR PRVWKTR ++GT+SK+ K
Sbjct: 1    MLSLRYSLPYLLLQTRESSTKLFTKKPNNVVVCAARGPRPRSPRVWKTRKRIGTISKAAK 60

Query: 836  LVECIKGLSNVKEEVYGALDSFIAWDLEFPLITVKKALKSLEHEKEWKRIIQVTKWMLSK 657
            ++ CIKGLSNVKEEVYGALDSFIAW+LEFPL+ VKKAL  LE EKEWK+IIQVTKWMLSK
Sbjct: 61   MIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDEKEWKKIIQVTKWMLSK 120

Query: 656  GQGRTMGSYYLLLYALAEDGRIDEAEELWTRLFSDNLESMPRIFFDRMISIYYRRQMHDK 477
            GQGRTMG+Y+ LL ALAED R+DEAEELW +LF ++LE  PR FF++MISIYY+R MH K
Sbjct: 121  GQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQK 180

Query: 476  MFEVFADMEELGIRPTVSIVNMVGDVFQKLGMLDXXXXXXXXXXXXKWEYRYIKGKRVKI 297
            +FEVFADMEELG++P V+IV+MVG VF KL M D            +WE+RYIKG+RVK+
Sbjct: 181  LFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKV 240

Query: 296  RSQNLKDPENA----TKEINEFGNETNRDEESNSDELEVDQN 183
            +++ L +        + + ++  NE   +EE   D  E +++
Sbjct: 241  KAKQLNELSEGEGGLSSDEDKIDNEIESEEEDGEDLSEEEED 282