BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024824
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...   190   1e-46
ref|XP_002527978.1| pentatricopeptide repeat-containing protein,...   162   3e-38
ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
emb|CBI23347.3| unnamed protein product [Vitis vinifera]              138   4e-31

>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  190 bits (482), Expect = 1e-46
 Identities = 101/166 (60%), Positives = 115/166 (69%), Gaps = 5/166 (3%)
 Frame = +1

Query: 1   RNSRDNELFPFSFQDLIEESGSKYHQKTQGRSPQGGG-----DPKVVFNVLDAILKGSLE 165
           R S    L PF+ +DLI   G++Y   TQ    Q  G     DP+VVFNVLDAILK SLE
Sbjct: 47  RPSGHGNLLPFALEDLIISVGNQYQVTTQDWFSQNKGHDEERDPRVVFNVLDAILKDSLE 106

Query: 166 RLKLMRESMSWEHIGHYNCTLKASYIQHVDTIRNLSLEGRLGVALWLRNKMIHKGVVPDV 345
           RLK+MRES+S   IG   CTL+  Y   V  IRNL LEG+L  ALWLRNKMI KGV+PDV
Sbjct: 107 RLKMMRESVSLTKIGLNGCTLEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDV 166

Query: 346 VTHNYLVNGFCKGGAFEKAEWLVREMCCWGPSPNCATYNTLMKGYC 483
           +THNYLVNG CK G  EKA+ LVREM   GPSPNCAT+NT +KGYC
Sbjct: 167 LTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYC 212


>ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532604|gb|EEF34390.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/156 (50%), Positives = 107/156 (68%), Gaps = 2/156 (1%)
 Frame = +1

Query: 31  FSFQDLIEESGSKYHQKTQGRSPQGGGDPKVVFNVLDAILKGSLERLKLMRESM--SWEH 204
           + F D+++   ++   +   ++     DP+VVFNVLDA+LKGSLERLK MRES+  S   
Sbjct: 54  YFFDDMVKTLSNRCRLRRDNKNLNDEDDPQVVFNVLDAMLKGSLERLKSMRESIGISSVK 113

Query: 205 IGHYNCTLKASYIQHVDTIRNLSLEGRLGVALWLRNKMIHKGVVPDVVTHNYLVNGFCKG 384
           +G    ++  SY  H   +R+L L G+LG ALWLR K++HKG VPD++THN+LVNG C  
Sbjct: 114 VGLAGRSVDVSYAGHASLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNS 173

Query: 385 GAFEKAEWLVREMCCWGPSPNCATYNTLMKGYCDLN 492
           G  +KA+ L++EM   GPSPNCAT+NT +KGYC LN
Sbjct: 174 GDLQKADCLIKEMLEIGPSPNCATFNTFIKGYCLLN 209


>ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|222874911|gb|EEF12042.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  149 bits (376), Expect = 2e-34
 Identities = 81/146 (55%), Positives = 103/146 (70%), Gaps = 2/146 (1%)
 Frame = +1

Query: 61  GSKYHQKTQGRSPQGGGDPKVVFNVLDAILKGSLERLKLMR-ESMSWEH-IGHYNCTLKA 234
           G ++    QG    GGGDP +VFNVLD++LKGSL+RLK MR + +S+ +  G   C L  
Sbjct: 6   GDEFSNNKQGDG--GGGDP-LVFNVLDSMLKGSLDRLKSMRLQFVSFLYGKGITGCALDV 62

Query: 235 SYIQHVDTIRNLSLEGRLGVALWLRNKMIHKGVVPDVVTHNYLVNGFCKGGAFEKAEWLV 414
           +   +   I++L L G+LG ALWLR+KMI KG VPDV+THNY+VNG CK    EKA+WL+
Sbjct: 63  NCAGNEAIIKDLCLGGKLGPALWLRSKMIQKGFVPDVLTHNYMVNGLCKMIELEKADWLI 122

Query: 415 REMCCWGPSPNCATYNTLMKGYCDLN 492
           REM   GPSPNCATYNT +KGYC L+
Sbjct: 123 REMLDKGPSPNCATYNTFIKGYCLLD 148


>ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Glycine max]
          Length = 577

 Score =  141 bits (356), Expect = 5e-32
 Identities = 74/136 (54%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
 Frame = +1

Query: 94  SPQGGGDPKVVFNVLDAILKGSLERLKLMRESMSWEHIG---HYNCTLKASYIQHVDTIR 264
           S  GG     VFN LD +LK SLERLK+MRE++     G    Y C  K  Y +   TIR
Sbjct: 70  SNDGGNGRHAVFNALDTMLKDSLERLKMMRENLCLVKTGLTIGYACESK--YAEDTATIR 127

Query: 265 NLSLEGRLGVALWLRNKMIHKGVVPDVVTHNYLVNGFCKGGAFEKAEWLVREMCCWGPSP 444
            L L+G+LG A+WL  KM  KGVV DV THN++VNG CK G  +KA+ +VREM  +GP P
Sbjct: 128 RLCLDGKLGAAVWLWGKMAQKGVVSDVFTHNHIVNGLCKIGLLDKADLVVREMLEFGPRP 187

Query: 445 NCATYNTLMKGYCDLN 492
           NCATYNTL+KGYC +N
Sbjct: 188 NCATYNTLIKGYCAVN 203


>emb|CBI23347.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/105 (64%), Positives = 77/105 (73%)
 Frame = +1

Query: 169 LKLMRESMSWEHIGHYNCTLKASYIQHVDTIRNLSLEGRLGVALWLRNKMIHKGVVPDVV 348
           +K  RES+S   IG   CTL+  Y   V  IRNL LEG+L  ALWLRNKMI KGV+PDV+
Sbjct: 1   MKFCRESVSLTKIGLNGCTLEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVL 60

Query: 349 THNYLVNGFCKGGAFEKAEWLVREMCCWGPSPNCATYNTLMKGYC 483
           THNYLVNG CK G  EKA+ LVREM   GPSPNCAT+NT +KGYC
Sbjct: 61  THNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYC 105