BLASTX nr result

ID: Atractylodes21_contig00024789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024789
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   267   7e-70
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...   256   2e-66
ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   254   5e-66
ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   254   8e-66
gb|AAF36454.1|AF127564_1 ubiquitin-protein ligase 1 [Arabidopsis...   235   4e-60

>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score =  267 bits (683), Expect = 7e-70
 Identities = 138/183 (75%), Positives = 154/183 (84%), Gaps = 6/183 (3%)
 Frame = +3

Query: 6    GNSTGYLTIEEGNRVLTIVCDMLKEHIPDMVMQAVLLLCARLTKTHTLAMHFLENGGMVA 185
            G STGYLTIEE  RVL + C++LK+ +P +VMQAVL LCARLTKTH+LA+ FLENGGM A
Sbjct: 1930 GKSTGYLTIEESRRVLLVACELLKQQVPAVVMQAVLQLCARLTKTHSLALEFLENGGMAA 1989

Query: 186  LFSIPRTCFFLVYDTVASAIIRHLIEDPQTLQTAMELEIRQTLSASRHAGRIPPRAFLTS 365
            LFS+PR+CFF  YDTVASAIIRHL+EDPQTLQTAMELEIRQTLS SRHAGR+ PRAFLTS
Sbjct: 1990 LFSLPRSCFFPGYDTVASAIIRHLLEDPQTLQTAMELEIRQTLSGSRHAGRVLPRAFLTS 2049

Query: 366  MAPLISRDPEIFMKAATAVCQLESSGGRTVVL---SKEKDKSKVPGVE---SSTECVRIP 527
            MAP+ISRDP +FMKAA AVCQLESSGGRTV++    KEKDK K   VE   SS ECVRI 
Sbjct: 2050 MAPVISRDPVVFMKAAAAVCQLESSGGRTVIVLSKEKEKDKPKSSSVELGLSSNECVRIH 2109

Query: 528  ENK 536
            ENK
Sbjct: 2110 ENK 2112


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score =  256 bits (653), Expect = 2e-66
 Identities = 131/182 (71%), Positives = 152/182 (83%), Gaps = 5/182 (2%)
 Frame = +3

Query: 6    GNSTGYLTIEEGNRVLTIVCDMLKEHIPDMVMQAVLLLCARLTKTHTLAMHFLENGGMVA 185
            G STGYLTIEE ++VL +VCD++K+H+P ++MQA+L LCARLTKTH LA+ FLENGG+ A
Sbjct: 1559 GKSTGYLTIEESHKVLLVVCDLMKQHVPAVIMQAILQLCARLTKTHVLALQFLENGGLTA 1618

Query: 186  LFSIPRTCFFLVYDTVASAIIRHLIEDPQTLQTAMELEIRQTLSASRHAGRIPPRAFLTS 365
            LF++PR+CFF  Y TVASAI+RHL+EDPQTLQTAMELEIRQTLS +RHAGR  PR FLTS
Sbjct: 1619 LFNLPRSCFFPGYQTVASAIVRHLLEDPQTLQTAMELEIRQTLSGNRHAGRFSPRTFLTS 1678

Query: 366  MAPLISRDPEIFMKAATAVCQLESSGGRT-VVLS----KEKDKSKVPGVESSTECVRIPE 530
            MAP+ISRDP +FMKAA AVCQLESSGGRT VVLS    KEKDKSK  G E   E VRI E
Sbjct: 1679 MAPVISRDPVVFMKAAAAVCQLESSGGRTFVVLSKEKEKEKDKSKASGAE---ESVRISE 1735

Query: 531  NK 536
            +K
Sbjct: 1736 SK 1737


>ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3739

 Score =  254 bits (650), Expect = 5e-66
 Identities = 126/184 (68%), Positives = 154/184 (83%), Gaps = 6/184 (3%)
 Frame = +3

Query: 6    GNSTGYLTIEEGNRVLTIVCDMLKEHIPDMVMQAVLLLCARLTKTHTLAMHFLENGGMVA 185
            G STG+ TI+E +++L I CD++K+H+P +VMQAVL LCARLTKTH LA+ FLENGG+ A
Sbjct: 1566 GKSTGFATIDESHKLLDIACDLIKQHVPAVVMQAVLQLCARLTKTHALALQFLENGGLAA 1625

Query: 186  LFSIPRTCFFLVYDTVASAIIRHLIEDPQTLQTAMELEIRQTLSASRHAGRIPPRAFLTS 365
            LF++PRTC F  YD+V SAI+RHL+EDPQTLQTAMELEIRQTLS +RH+GR+ PR+FLTS
Sbjct: 1626 LFNLPRTCLFPGYDSVVSAIVRHLLEDPQTLQTAMELEIRQTLSGNRHSGRVSPRSFLTS 1685

Query: 366  MAPLISRDPEIFMKAATAVCQLESSGGRTVVL---SKEKDKSKVPGVE---SSTECVRIP 527
            +AP+ISRDP +FMKAA AVCQ+E+SGGRTVV+    KEK+KSK   VE   SS ECVRIP
Sbjct: 1686 LAPVISRDPMVFMKAAAAVCQIETSGGRTVVVLSKEKEKEKSKSSSVEVGLSSNECVRIP 1745

Query: 528  ENKS 539
            E KS
Sbjct: 1746 EIKS 1749


>ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3713

 Score =  254 bits (648), Expect = 8e-66
 Identities = 126/181 (69%), Positives = 153/181 (84%), Gaps = 4/181 (2%)
 Frame = +3

Query: 6    GNSTGYLTIEEGNRVLTIVCDMLKEHIPDMVMQAVLLLCARLTKTHTLAMHFLENGGMVA 185
            G STG+ TI+E  ++L I CD++K+H+P +VMQAVL LCARLTKTH LA+ FLE G +VA
Sbjct: 1553 GKSTGFATIDESRKLLDIACDLIKQHVPAVVMQAVLQLCARLTKTHALALQFLEKGSLVA 1612

Query: 186  LFSIPRTCFFLVYDTVASAIIRHLIEDPQTLQTAMELEIRQTLSASRHAGRIPPRAFLTS 365
            LF++PRTCFF  YD+V SAI+RHL+EDPQTLQTAMELEIRQTLS +R +GR+ PR+FLTS
Sbjct: 1613 LFNLPRTCFFPGYDSVVSAIVRHLLEDPQTLQTAMELEIRQTLSGNRQSGRVSPRSFLTS 1672

Query: 366  MAPLISRDPEIFMKAATAVCQLESSGGRT-VVLSKEKDKSKVPGVE---SSTECVRIPEN 533
            +AP+ISRDP +FMKAA AVCQ+E+SGGRT VVLSKEK+KSK   VE   SS ECVRIPE+
Sbjct: 1673 LAPVISRDPMVFMKAAAAVCQIETSGGRTVVVLSKEKEKSKSSSVEVGLSSNECVRIPES 1732

Query: 534  K 536
            K
Sbjct: 1733 K 1733


>gb|AAF36454.1|AF127564_1 ubiquitin-protein ligase 1 [Arabidopsis thaliana]
          Length = 3681

 Score =  235 bits (599), Expect = 4e-60
 Identities = 118/182 (64%), Positives = 143/182 (78%), Gaps = 4/182 (2%)
 Frame = +3

Query: 3    FGNSTGYLTIEEGNRVLTIVCDMLKEHIPDMVMQAVLLLCARLTKTHTLAMHFLENGGMV 182
            FG STGYLT+EEG++ L I C ++K+H+P M+MQAVL LCARLTK+H LA+ FLENGG+ 
Sbjct: 1538 FGKSTGYLTMEEGHKALLIACGLIKQHVPAMIMQAVLQLCARLTKSHALAIQFLENGGLS 1597

Query: 183  ALFSIPRTCFFLVYDTVASAIIRHLIEDPQTLQTAMELEIRQTLSASRHAGRIPPRAFLT 362
            +LF++P+ C F  YDTVAS I+RHL+EDPQTLQ AME EIRQTLS  RH GR+ PR FLT
Sbjct: 1598 SLFNLPKKCCFPGYDTVASVIVRHLVEDPQTLQIAMETEIRQTLSGKRHIGRVLPRTFLT 1657

Query: 363  SMAPLISRDPEIFMKAATAVCQLESSGGRT-VVLSKEKDKSKVPGVE---SSTECVRIPE 530
            +MAP+ISRDP +FMKA  + CQLESSGGR  V+LSKEK+K KV G E   S  E + I E
Sbjct: 1658 TMAPVISRDPVVFMKAVASTCQLESSGGRDFVILSKEKEKPKVSGSEHGFSLNEPLGISE 1717

Query: 531  NK 536
            NK
Sbjct: 1718 NK 1719


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