BLASTX nr result

ID: Atractylodes21_contig00024788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024788
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   136   2e-30
ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [...   134   8e-30
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   119   3e-25
ref|XP_004148253.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   119   3e-25

>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score =  136 bits (343), Expect = 2e-30
 Identities = 80/125 (64%), Positives = 92/125 (73%), Gaps = 3/125 (2%)
 Frame = -3

Query: 368  ENKSQDGPIKS-KGQKKISANLTQVIHHMLEIILTYPSLNPEEGYTRSTNAMEVDEPATS 192
            ENK  DGP K  KG KKI ANLTQVI  +LEI+L YP+    E  T  + AMEVDEP T 
Sbjct: 2110 ENKIHDGPGKCPKGHKKIPANLTQVIDLLLEIVLKYPAPKSPEDGTGYSTAMEVDEPTTK 2169

Query: 191  -KGKSKVNETRE-ESDILPESLAGTAKVTFVLMLLSDILLMYAHAVGIVLKRDLETCQLR 18
             KGKSKV+ET++ ESD L E  AG AKVTFVL LLSDILLMY H+VG++L+RDLE  QLR
Sbjct: 2170 VKGKSKVDETKKIESDNLSERSAGLAKVTFVLKLLSDILLMYVHSVGVILRRDLEMSQLR 2229

Query: 17   GFNQL 3
            G +QL
Sbjct: 2230 GSSQL 2234


>ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223538012|gb|EEF39625.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3691

 Score =  134 bits (337), Expect = 8e-30
 Identities = 78/124 (62%), Positives = 91/124 (73%), Gaps = 3/124 (2%)
 Frame = -3

Query: 368  ENKSQDGPIK-SKGQKKISANLTQVIHHMLEIILTYPSLNPEEGYTRSTNAMEVDEPATS 192
            ENK  DG  K +KG KKI ANLTQVI  +L+I+L +P    EEG    + +MEVDEPAT 
Sbjct: 1669 ENKVHDGSGKCAKGHKKIPANLTQVIDQLLDIVLKFPVPKSEEGCISDSTSMEVDEPATK 1728

Query: 191  -KGKSKVNETRE-ESDILPESLAGTAKVTFVLMLLSDILLMYAHAVGIVLKRDLETCQLR 18
             KGKSK++ETR+ ES+   E  AG AKVTFVL LLSDILLMY HAVG++LKRD E CQLR
Sbjct: 1729 VKGKSKIDETRKMESE--SERSAGLAKVTFVLKLLSDILLMYVHAVGVILKRDSELCQLR 1786

Query: 17   GFNQ 6
            G NQ
Sbjct: 1787 GSNQ 1790


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score =  125 bits (315), Expect = 3e-27
 Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 2/123 (1%)
 Frame = -3

Query: 368  ENKSQDGPIK-SKGQKKISANLTQVIHHMLEIILTYPSLNPEEGYTRSTNAMEVDEPATS 192
            E+K  DG  K +KG KKI ANLTQVI  +L+I+L +P    +EG     N+M+VDEPAT 
Sbjct: 1735 ESKMHDGSGKCAKGHKKIPANLTQVIDQLLDIVLKHPLPKSQEGCVGDLNSMDVDEPATK 1794

Query: 191  -KGKSKVNETREESDILPESLAGTAKVTFVLMLLSDILLMYAHAVGIVLKRDLETCQLRG 15
             KGKSKV+E ++ ++   E  AG AKV FVL LLSDILLMY HAVG++L+RDLE C LRG
Sbjct: 1795 LKGKSKVDEAKK-TESESEISAGLAKVNFVLKLLSDILLMYVHAVGVILRRDLELCHLRG 1853

Query: 14   FNQ 6
             NQ
Sbjct: 1854 SNQ 1856


>ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL1-like
            [Cucumis sativus]
          Length = 3692

 Score =  119 bits (297), Expect = 3e-25
 Identities = 70/124 (56%), Positives = 82/124 (66%), Gaps = 2/124 (1%)
 Frame = -3

Query: 368  ENKSQDGPIK-SKGQKKISANLTQVIHHMLEIILTYPSLNPEEGYTRSTNAMEVDEPATS 192
            ENK  DG  K SK  KKI ANLTQVI  ++EI+L YP    +     +  +MEVDEP T 
Sbjct: 1675 ENKIFDGSAKCSKNHKKIPANLTQVIDQLIEIVLKYPLTQNQVDSVSNVCSMEVDEPNTK 1734

Query: 191  -KGKSKVNETREESDILPESLAGTAKVTFVLMLLSDILLMYAHAVGIVLKRDLETCQLRG 15
             KGKSKV + +   D   +S  G AKVTFVL LLSDILLMY HAVG++L+RD E CQLRG
Sbjct: 1735 VKGKSKVVDKKNSEDESEKS-TGLAKVTFVLKLLSDILLMYVHAVGVILRRDSEMCQLRG 1793

Query: 14   FNQL 3
             N L
Sbjct: 1794 CNHL 1797


>ref|XP_004148253.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Cucumis sativus]
          Length = 3692

 Score =  119 bits (297), Expect = 3e-25
 Identities = 70/124 (56%), Positives = 82/124 (66%), Gaps = 2/124 (1%)
 Frame = -3

Query: 368  ENKSQDGPIK-SKGQKKISANLTQVIHHMLEIILTYPSLNPEEGYTRSTNAMEVDEPATS 192
            ENK  DG  K SK  KKI ANLTQVI  ++EI+L YP    +     +  +MEVDEP T 
Sbjct: 1675 ENKIFDGSAKCSKNHKKIPANLTQVIDQLIEIVLKYPLTQNQVDSVSNVCSMEVDEPNTK 1734

Query: 191  -KGKSKVNETREESDILPESLAGTAKVTFVLMLLSDILLMYAHAVGIVLKRDLETCQLRG 15
             KGKSKV + +   D   +S  G AKVTFVL LLSDILLMY HAVG++L+RD E CQLRG
Sbjct: 1735 VKGKSKVVDKKNSEDESEKS-TGLAKVTFVLKLLSDILLMYVHAVGVILRRDSEMCQLRG 1793

Query: 14   FNQL 3
             N L
Sbjct: 1794 CNHL 1797


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