BLASTX nr result
ID: Atractylodes21_contig00024764
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00024764
(543 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526718.1| nucleic acid binding protein, putative [Rici... 292 3e-77
ref|XP_002308038.1| predicted protein [Populus trichocarpa] gi|2... 283 9e-75
gb|ADL36655.1| C3HL domain class transcription factor [Malus x d... 281 5e-74
ref|XP_003546887.1| PREDICTED: zinc finger CCCH domain-containin... 281 6e-74
ref|XP_003533897.1| PREDICTED: zinc finger CCCH domain-containin... 280 1e-73
>ref|XP_002526718.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223533907|gb|EEF35632.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 728
Score = 292 bits (747), Expect = 3e-77
Identities = 135/208 (64%), Positives = 158/208 (75%), Gaps = 28/208 (13%)
Frame = +1
Query: 4 RPIDVVLVPPNLPGLKISLEKLLQNGGSGIEQGDDLGLTSFKSNLDN------------- 144
RPIDV++VPP L G+K +LE+LL N GS IE+ DL +++ SN +
Sbjct: 161 RPIDVIVVPPKLDGVKFALEELLVNDGSVIER--DLRVSTATSNSTSPPLSPSVGNGSPL 218
Query: 145 ---------------VSTSHEKKEYPTDPFFPDLKSDVYSTDEFRMFAFKIRPCSRAYSH 279
+ST+ EKKEYP DP PD+K+ +YSTDEFRM++FK+RPCSRAYSH
Sbjct: 219 SSSDSPVKSKLHDATISTASEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSH 278
Query: 280 DWTECPFIHPGESARRRDPRKIHYSCVPCPDFKKGQCRRGDLCEFAHGVFECWLHPAQYR 459
DWTECPF+HPGE+ARRRDPRK HYSCVPCPDF+KG CRRGD+CE+AHGVFECWLHPAQYR
Sbjct: 279 DWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYR 338
Query: 460 TRLCKDGTYCARRVCFFAHTPEELRPLY 543
TRLCKDGT CARRVCFFAHT EELRPLY
Sbjct: 339 TRLCKDGTSCARRVCFFAHTVEELRPLY 366
>ref|XP_002308038.1| predicted protein [Populus trichocarpa] gi|222854014|gb|EEE91561.1|
predicted protein [Populus trichocarpa]
Length = 735
Score = 283 bits (725), Expect = 9e-75
Identities = 128/204 (62%), Positives = 152/204 (74%), Gaps = 24/204 (11%)
Frame = +1
Query: 4 RPIDVVLVPPNLPGLKISLEKLLQNGGSGIEQGDDLGLTSFKSN---------------- 135
RPIDV++VPP L +++ L+ LL GS +EQ + + + SN
Sbjct: 161 RPIDVIVVPPKLQDVRLVLKDLLAADGSHVEQNLRVSIATENSNSPPLSPSMENGSPLSG 220
Query: 136 --------LDNVSTSHEKKEYPTDPFFPDLKSDVYSTDEFRMFAFKIRPCSRAYSHDWTE 291
L++ + EKKEYP DP PD+K+ +YSTDEFRM++FK+RPCSRAYSHDWTE
Sbjct: 221 SDSPTKAKLNDAPLASEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTE 280
Query: 292 CPFIHPGESARRRDPRKIHYSCVPCPDFKKGQCRRGDLCEFAHGVFECWLHPAQYRTRLC 471
CPF+HPGE+ARRRDPRK HYSCVPCPDF+KG CRRGD+CE+AHGVFECWLHPAQYRTRLC
Sbjct: 281 CPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLC 340
Query: 472 KDGTYCARRVCFFAHTPEELRPLY 543
KDGT CARRVCFFAHT EELRPLY
Sbjct: 341 KDGTNCARRVCFFAHTVEELRPLY 364
>gb|ADL36655.1| C3HL domain class transcription factor [Malus x domestica]
Length = 736
Score = 281 bits (719), Expect = 5e-74
Identities = 130/207 (62%), Positives = 152/207 (73%), Gaps = 27/207 (13%)
Frame = +1
Query: 4 RPIDVVLVPPNLPGLKISLEKLLQNGGS--------------------------GIEQGD 105
RPIDV++VPP L +K++LE+LL G+ G
Sbjct: 161 RPIDVIVVPPRLQNVKLALEELLVINGTAGEKTLTVSTRTIHSTSPPLSASPENGSPSAL 220
Query: 106 DLGLTSFKSNLDN-VSTSHEKKEYPTDPFFPDLKSDVYSTDEFRMFAFKIRPCSRAYSHD 282
D + KS N +S++ EKKEYP DP PD+K+ +YSTDEFRM++FK+RPCSRAYSHD
Sbjct: 221 DFTCSPTKSKFYNSLSSASEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHD 280
Query: 283 WTECPFIHPGESARRRDPRKIHYSCVPCPDFKKGQCRRGDLCEFAHGVFECWLHPAQYRT 462
WTECPF+HPGE+ARRRDPRK HYSCVPCPDF+KG CRRGD+CE+AHGVFECWLHPAQYRT
Sbjct: 281 WTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRT 340
Query: 463 RLCKDGTYCARRVCFFAHTPEELRPLY 543
RLCKDGT CARRVCFFAHT EELRPLY
Sbjct: 341 RLCKDGTSCARRVCFFAHTTEELRPLY 367
>ref|XP_003546887.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
[Glycine max]
Length = 683
Score = 281 bits (718), Expect = 6e-74
Identities = 125/180 (69%), Positives = 143/180 (79%)
Frame = +1
Query: 4 RPIDVVLVPPNLPGLKISLEKLLQNGGSGIEQGDDLGLTSFKSNLDNVSTSHEKKEYPTD 183
RP+DV++VPP L GLK +LE LL + S V++ EKKEYP D
Sbjct: 158 RPVDVIVVPPKLEGLKATLEDLLSDTAS--------------DGSIAVNSVSEKKEYPID 203
Query: 184 PFFPDLKSDVYSTDEFRMFAFKIRPCSRAYSHDWTECPFIHPGESARRRDPRKIHYSCVP 363
P PD+K+ +Y+TDEFRMF+FK+RPCSRAYSHDWTECPF+HPGE+ARRRDPRK HYSCVP
Sbjct: 204 PSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVP 263
Query: 364 CPDFKKGQCRRGDLCEFAHGVFECWLHPAQYRTRLCKDGTYCARRVCFFAHTPEELRPLY 543
CPDF+KG CRRGD+CE+AHGVFECWLHPAQYRTRLCKDGT C RRVCFFAHT EELRPLY
Sbjct: 264 CPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTAEELRPLY 323
>ref|XP_003533897.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
[Glycine max]
Length = 701
Score = 280 bits (716), Expect = 1e-73
Identities = 129/205 (62%), Positives = 150/205 (73%), Gaps = 25/205 (12%)
Frame = +1
Query: 4 RPIDVVLVPPNLPGLKISLEKLLQNGGSGIEQGDDLGLTSFKSNLDN------------- 144
RP+DV++VPP L GLK +LE LL + S GD S S+ +
Sbjct: 131 RPVDVLVVPPKLEGLKATLEDLLSDSTSVGSVGDCFIPVSVNSSCSDSAAHLSSPENGLP 190
Query: 145 ------------VSTSHEKKEYPTDPFFPDLKSDVYSTDEFRMFAFKIRPCSRAYSHDWT 288
V+++ EKKEYP DP PD+K+ +Y+TDEFRMF+FK+RPCSRAYSHDWT
Sbjct: 191 FSAMASKFADTAVNSASEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWT 250
Query: 289 ECPFIHPGESARRRDPRKIHYSCVPCPDFKKGQCRRGDLCEFAHGVFECWLHPAQYRTRL 468
ECPF+HPGE+ARRRDPRK HYSCVPCPDF+KG CRRGD+CE+AHGVFECWLHPAQYRTRL
Sbjct: 251 ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL 310
Query: 469 CKDGTYCARRVCFFAHTPEELRPLY 543
CKDGT C RRVCFFAHT EELRPLY
Sbjct: 311 CKDGTSCNRRVCFFAHTAEELRPLY 335