BLASTX nr result

ID: Atractylodes21_contig00024729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024729
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containi...    56   5e-06
ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    55   9e-06
emb|CBI28530.3| unnamed protein product [Vitis vinifera]               55   9e-06

>ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Cucumis sativus]
           gi|449477571|ref|XP_004155060.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Cucumis sativus]
          Length = 487

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 28/39 (71%), Positives = 34/39 (87%), Gaps = 1/39 (2%)
 Frame = -2

Query: 597 QMIEEGLMLERKFY-NLIGILCGVKRESYALELFELMKK 484
           +MIEEGL  +RKFY +LIGILCGV+R +YALELFE MK+
Sbjct: 358 EMIEEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKR 396


>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61370, mitochondrial-like [Vitis vinifera]
          Length = 505

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 26/39 (66%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
 Frame = -2

Query: 597 QMIEEGLMLERKFY-NLIGILCGVKRESYALELFELMKK 484
           +MIEEGL+ +RKFY +LIG+LCGV+R +YALE+FE MK+
Sbjct: 348 EMIEEGLVPDRKFYYDLIGVLCGVERVNYALEMFERMKR 386


>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 26/39 (66%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
 Frame = -2

Query: 597 QMIEEGLMLERKFY-NLIGILCGVKRESYALELFELMKK 484
           +MIEEGL+ +RKFY +LIG+LCGV+R +YALE+FE MK+
Sbjct: 317 EMIEEGLVPDRKFYYDLIGVLCGVERVNYALEMFERMKR 355


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