BLASTX nr result

ID: Atractylodes21_contig00024725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024725
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889814.1| DNA polymerase lambda [Arabidopsis lyrata su...   100   2e-19
gb|AAD39573.1|AC007067_13 T10O24.13 [Arabidopsis thaliana]             98   8e-19
ref|NP_172522.2| DNA polymerase lambda subunit [Arabidopsis thal...    98   8e-19
ref|XP_002314725.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_003519932.1| PREDICTED: DNA polymerase lambda-like [Glyci...    93   3e-17

>ref|XP_002889814.1| DNA polymerase lambda [Arabidopsis lyrata subsp. lyrata]
           gi|297335656|gb|EFH66073.1| DNA polymerase lambda
           [Arabidopsis lyrata subsp. lyrata]
          Length = 529

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/71 (63%), Positives = 58/71 (81%)
 Frame = -2

Query: 213 DPHGIFAGMVVFLVDNGVQRRRLQIWKQKLVQMGAIVEDETLSQNVTHVFAVNSDSLRQK 34
           DP G+FAGMVVF+V+ GVQRRR QIWKQKLVQMGA++E + +++ VTHV A+N D+L  K
Sbjct: 14  DPEGMFAGMVVFMVEIGVQRRRFQIWKQKLVQMGAVIEKDRVTKKVTHVLAMNLDALLDK 73

Query: 33  FGPKLLQHFKG 1
           FG + L HF+G
Sbjct: 74  FGKERLSHFRG 84


>gb|AAD39573.1|AC007067_13 T10O24.13 [Arabidopsis thaliana]
          Length = 559

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/69 (63%), Positives = 58/69 (84%)
 Frame = -2

Query: 213 DPHGIFAGMVVFLVDNGVQRRRLQIWKQKLVQMGAIVEDETLSQNVTHVFAVNSDSLRQK 34
           DP G+FAGMVVF+V+ GVQRRRLQIWKQKLVQMGA++E++ +++ VTHV A+N ++L  K
Sbjct: 14  DPEGMFAGMVVFMVEIGVQRRRLQIWKQKLVQMGAVIEEDRVTKKVTHVLAMNLEALLHK 73

Query: 33  FGPKLLQHF 7
           FG + L HF
Sbjct: 74  FGKERLSHF 82


>ref|NP_172522.2| DNA polymerase lambda subunit [Arabidopsis thaliana]
           gi|12053869|emb|CAC21394.1| DNA polymerase lambda
           [Arabidopsis thaliana] gi|91805767|gb|ABE65612.1| DNA
           polymerase lambda [Arabidopsis thaliana]
           gi|304440990|gb|ADM33939.1| DNA pol lambda [Arabidopsis
           thaliana] gi|332190467|gb|AEE28588.1| DNA polymerase
           lambda subunit [Arabidopsis thaliana]
          Length = 529

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/69 (63%), Positives = 58/69 (84%)
 Frame = -2

Query: 213 DPHGIFAGMVVFLVDNGVQRRRLQIWKQKLVQMGAIVEDETLSQNVTHVFAVNSDSLRQK 34
           DP G+FAGMVVF+V+ GVQRRRLQIWKQKLVQMGA++E++ +++ VTHV A+N ++L  K
Sbjct: 14  DPEGMFAGMVVFMVEIGVQRRRLQIWKQKLVQMGAVIEEDRVTKKVTHVLAMNLEALLHK 73

Query: 33  FGPKLLQHF 7
           FG + L HF
Sbjct: 74  FGKERLSHF 82


>ref|XP_002314725.1| predicted protein [Populus trichocarpa] gi|222863765|gb|EEF00896.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/70 (68%), Positives = 56/70 (80%)
 Frame = -2

Query: 213 DPHGIFAGMVVFLVDNGVQRRRLQIWKQKLVQMGAIVEDETLSQNVTHVFAVNSDSLRQK 34
           DP GIF+GMVVFLV+ GVQ RRLQIWKQKLVQMGA  E E LS+ VTHVFA+NS +L Q+
Sbjct: 12  DPQGIFSGMVVFLVETGVQSRRLQIWKQKLVQMGATTE-ERLSKKVTHVFAINSQALLQQ 70

Query: 33  FGPKLLQHFK 4
              +LL+ FK
Sbjct: 71  LDGQLLKRFK 80


>ref|XP_003519932.1| PREDICTED: DNA polymerase lambda-like [Glycine max]
          Length = 534

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/72 (62%), Positives = 57/72 (79%)
 Frame = -2

Query: 216 SDPHGIFAGMVVFLVDNGVQRRRLQIWKQKLVQMGAIVEDETLSQNVTHVFAVNSDSLRQ 37
           SDPHG+F+GMVVFLV  GVQ RR QIWK++LVQMGA++E E  S+ VTHVFA++SD+L Q
Sbjct: 9   SDPHGMFSGMVVFLVPKGVQSRRFQIWKERLVQMGAVIE-ERFSKRVTHVFAMHSDALLQ 67

Query: 36  KFGPKLLQHFKG 1
           +   + L  FKG
Sbjct: 68  QLDRERLSRFKG 79


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