BLASTX nr result

ID: Atractylodes21_contig00024719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024719
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003208050.1| putative polyprotein [Pelargonium vein bandi...   143   1e-32
ref|YP_001293182.1| hypothetical protein LBBV_gp3 [Lucky bamboo ...   127   7e-28
ref|YP_610965.1| hypothetical protein DMV_gp3 [Dracaena mottle v...   127   7e-28
ref|NP_758808.1| polyprotein [Taro bacilliform virus] gi|2581483...   124   8e-27
ref|YP_002916056.1| polyprotein [Sweetpotato badnavirus B] gi|23...   107   8e-22

>ref|YP_003208050.1| putative polyprotein [Pelargonium vein banding virus]
            gi|258547408|gb|ACV74337.1| putative polyprotein
            [Pelargonium vein banding virus]
          Length = 1970

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/113 (58%), Positives = 85/113 (75%), Gaps = 1/113 (0%)
 Frame = -3

Query: 357  NQHWMLPPVWE-QGVLLILPQDPGLWPDVIARWESATINRLNSQTWSDNKAKLGFVENLL 181
            +  W LP   +  G +L+LP+D GL+ +VI+RWES TIN LN +TW +NKA++ +VENLL
Sbjct: 668  SNQWNLPSAQQVNGAMLVLPEDIGLYEEVISRWESITINLLNDRTWDNNKARVIYVENLL 727

Query: 180  GGQEKLAWQQWRTAFPESYASLEAIADDPQNITSQIRQIILMEDPYRGSTEEQ 22
            G  EK  WQQWRT + + Y  L AIADDPQ+ITSQ+R +I +EDPYRGSTEEQ
Sbjct: 728  GESEKKIWQQWRTTYTKEYEELVAIADDPQDITSQVRMVITLEDPYRGSTEEQ 780


>ref|YP_001293182.1| hypothetical protein LBBV_gp3 [Lucky bamboo bacilliform virus]
           gi|148645292|gb|ABR01170.1| hypothetical protein [Lucky
           bamboo bacilliform virus]
          Length = 1913

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/102 (59%), Positives = 78/102 (76%)
 Frame = -3

Query: 324 QGVLLILPQDPGLWPDVIARWESATINRLNSQTWSDNKAKLGFVENLLGGQEKLAWQQWR 145
           QG LL+LP+D GL+ DVI+RWE+ T+N L  + +SDN++KL +VENLLG  EK  W QWR
Sbjct: 595 QGALLVLPEDIGLYQDVISRWETITLNVLADKVFSDNRSKLMYVENLLGEDEKKVWIQWR 654

Query: 144 TAFPESYASLEAIADDPQNITSQIRQIILMEDPYRGSTEEQD 19
            AF + Y SL A+ADD Q I SQ+R+II +EDP +GSTEEQD
Sbjct: 655 MAFEQEYESLIAVADDSQAIISQVRRIITLEDPSQGSTEEQD 696


>ref|YP_610965.1| hypothetical protein DMV_gp3 [Dracaena mottle virus]
           gi|92430216|gb|ABE77344.1| hypothetical protein
           [Dracaena mottle virus]
          Length = 1916

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/102 (59%), Positives = 79/102 (77%)
 Frame = -3

Query: 324 QGVLLILPQDPGLWPDVIARWESATINRLNSQTWSDNKAKLGFVENLLGGQEKLAWQQWR 145
           +G LL+LP+D GL+ DVI+RWE+ T+N L  + +SDN++KL +VENLLG  EK AW QWR
Sbjct: 597 RGALLVLPEDIGLYQDVISRWETITLNVLADKVFSDNRSKLMYVENLLGEDEKKAWIQWR 656

Query: 144 TAFPESYASLEAIADDPQNITSQIRQIILMEDPYRGSTEEQD 19
            AF + Y SL A+ADD Q I SQ+R+II +EDP +GSTEEQD
Sbjct: 657 MAFEQEYESLIAVADDSQAIISQVRRIITLEDPSQGSTEEQD 698


>ref|NP_758808.1| polyprotein [Taro bacilliform virus]
           gi|25814833|gb|AAN75640.1|AF357836_3 polyprotein [taro
           bacilliform virus]
          Length = 1881

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/110 (50%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
 Frame = -3

Query: 342 LPPVW-EQGVLLILPQDPGLWPDVIARWESATINRLNSQTWSDNKAKLGFVENLLGGQEK 166
           LPP + +QG +L+LP D GL+ D I+RWES T+N +N + W  N+AK  ++ENLLG  EK
Sbjct: 467 LPPAYNQQGAILVLPDDIGLYEDTISRWESITLNMMNEKVWPSNEAKAKYMENLLGEMEK 526

Query: 165 LAWQQWRTAFPESYASLEAIADDPQNITSQIRQIILMEDPYRGSTEEQDE 16
             W QWRT +   Y +L   +D+ QN+ SQ+R+I L++DPY+GST EQD+
Sbjct: 527 KTWIQWRTTYVSEYDALVQQSDETQNLLSQVRRIFLLQDPYQGSTAEQDQ 576


>ref|YP_002916056.1| polyprotein [Sweetpotato badnavirus B] gi|237846579|gb|ACN56750.1|
           polyprotein [Sweetpotato badnavirus B]
          Length = 1170

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/121 (43%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
 Frame = -3

Query: 357 NQHWMLPPVWEQG-VLLILPQDPGLWPDVIARWESATINRLNSQTWSDNKAKLGFVENLL 181
           N++W LPP  +QG VLL LP+  GL  DV  RWE+ T+N ++     D + K+ ++ENLL
Sbjct: 618 NENWSLPPAQQQGGVLLTLPEQMGLLNDVFMRWETTTLNHMSLMNIQDTQEKVDYMENLL 677

Query: 180 GGQEKLAWQQWRTAFPESYASLEAIAD---DPQNITSQIRQIILMEDPYRGSTEEQDEKA 10
           G   KLAW QWRT + + Y ++ A A+     QN+ SQ+R+I+ + DP +GST  QD+  
Sbjct: 678 GETAKLAWIQWRTVYEDEYKAIVAQAEGRMGTQNVISQVRRILTLSDPVQGSTAIQDQAY 737

Query: 9   R 7
           R
Sbjct: 738 R 738


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