BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024717
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    60   1e-10
emb|CBI28530.3| unnamed protein product [Vitis vinifera]               60   1e-10
ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago t...    54   5e-09
ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containi...    53   2e-08
ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arab...    50   2e-07

>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61370, mitochondrial-like [Vitis vinifera]
          Length = 505

 Score = 60.5 bits (145), Expect(3) = 1e-10
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = +1

Query: 412 TVRVKESLQILNTMRKT*CSPDWVSYYLVARVLYLTCRF 528
           T RVKES +IL+ M++  CSPDWVSYYLVARVLYLT RF
Sbjct: 301 TRRVKESCRILDLMKRLGCSPDWVSYYLVARVLYLTGRF 339



 Score = 28.1 bits (61), Expect(3) = 1e-10
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +2

Query: 284 GITPDFFCYNTF 319
           GI PD FCYNTF
Sbjct: 241 GIMPDLFCYNTF 252



 Score = 21.6 bits (44), Expect(3) = 1e-10
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 8/38 (21%)
 Frame = +3

Query: 318 FSNVFARKT*KSNPY--------VMIEMRTYVIAPTTI 407
           F      +  KSNP         VM+EMR+  I PT+I
Sbjct: 252 FLRCLCERNLKSNPSGLVPEALNVMMEMRSNRITPTSI 289


>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 60.5 bits (145), Expect(3) = 1e-10
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = +1

Query: 412 TVRVKESLQILNTMRKT*CSPDWVSYYLVARVLYLTCRF 528
           T RVKES +IL+ M++  CSPDWVSYYLVARVLYLT RF
Sbjct: 270 TRRVKESCRILDLMKRLGCSPDWVSYYLVARVLYLTGRF 308



 Score = 28.1 bits (61), Expect(3) = 1e-10
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +2

Query: 284 GITPDFFCYNTF 319
           GI PD FCYNTF
Sbjct: 210 GIMPDLFCYNTF 221



 Score = 21.6 bits (44), Expect(3) = 1e-10
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 8/38 (21%)
 Frame = +3

Query: 318 FSNVFARKT*KSNPY--------VMIEMRTYVIAPTTI 407
           F      +  KSNP         VM+EMR+  I PT+I
Sbjct: 221 FLRCLCERNLKSNPSGLVPEALNVMMEMRSNRITPTSI 258


>ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497182|gb|AES78385.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 563

 Score = 53.9 bits (128), Expect(3) = 5e-09
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +1

Query: 412 TVRVKESLQILNTMRKT*CSPDWVSYYLVARVLYLTCRF 528
           T RVKES QIL  M K+  +PDWVSYYLV+RVL+L+ RF
Sbjct: 375 TRRVKESCQILEAMNKSGVAPDWVSYYLVSRVLFLSGRF 413



 Score = 27.3 bits (59), Expect(3) = 5e-09
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 284 GITPDFFCYNTF 319
           G+TPD  CYNTF
Sbjct: 315 GVTPDLVCYNTF 326



 Score = 23.5 bits (49), Expect(3) = 5e-09
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 363 VMIEMRTYVIAPTTI 407
           VM+EMR+Y + PT+I
Sbjct: 349 VMMEMRSYKVFPTSI 363


>ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Cucumis sativus]
           gi|449477571|ref|XP_004155060.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Cucumis sativus]
          Length = 487

 Score = 53.1 bits (126), Expect(3) = 2e-08
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +1

Query: 412 TVRVKESLQILNTMRKT*CSPDWVSYYLVARVLYLTCRF 528
           T RVKES +IL  M++T C PD VSYYL+ARVL+LT RF
Sbjct: 311 TRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRF 349



 Score = 26.2 bits (56), Expect(3) = 2e-08
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 284 GITPDFFCYNTF 319
           G  PD FCYNTF
Sbjct: 251 GTMPDLFCYNTF 262



 Score = 23.1 bits (48), Expect(3) = 2e-08
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 363 VMIEMRTYVIAPTTI 407
           VM+EMR+Y I+P +I
Sbjct: 285 VMMEMRSYKISPNSI 299


>ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arabidopsis lyrata subsp.
           lyrata] gi|297312265|gb|EFH42689.1| hypothetical protein
           ARALYDRAFT_496296 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score = 50.1 bits (118), Expect(3) = 2e-07
 Identities = 24/39 (61%), Positives = 28/39 (71%)
 Frame = +1

Query: 412 TVRVKESLQILNTMRKT*CSPDWVSYYLVARVLYLTCRF 528
           T RV+ES QIL  M+++ C PD  SYY V RVLYLT RF
Sbjct: 300 TRRVRESCQILEQMKRSGCDPDTASYYFVVRVLYLTGRF 338



 Score = 25.0 bits (53), Expect(3) = 2e-07
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 284 GITPDFFCYNT 316
           GITPD FC+N+
Sbjct: 240 GITPDLFCFNS 250



 Score = 24.3 bits (51), Expect(3) = 2e-07
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 363 VMIEMRTYVIAPTTI 407
           +M+EMR+Y I PT+I
Sbjct: 274 IMLEMRSYKIQPTSI 288