BLASTX nr result

ID: Atractylodes21_contig00024696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024696
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302415.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
emb|CBI19420.3| unnamed protein product [Vitis vinifera]               92   4e-17
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]    92   4e-17
gb|ADD09583.1| transcription initiation factor [Trifolium repens]      88   8e-16

>ref|XP_002302415.1| predicted protein [Populus trichocarpa] gi|222844141|gb|EEE81688.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 52/100 (52%), Positives = 67/100 (67%)
 Frame = +1

Query: 1   REGGSDAGSASQPSIDVGPKPVSTSERNSKDNPDMERSSGAVTATPGPARKSLRNQDSPQ 180
           RE G +  S+SQP  DV   P S S RN K+N + E+ S AV +  G  RK  RNQ    
Sbjct: 277 REVGMEGASSSQPVNDVNRNPQSPSGRNVKENLEAEKRSPAVPSASGAVRKFGRNQAIVP 336

Query: 181 SGKIPRTISVKDVISVLGREIQMSRSTLIYRLYEKVRSES 300
             K+ RTI+VKDV++VL RE QMSRSTLIY+LYE++RS++
Sbjct: 337 QTKVVRTITVKDVMAVLEREPQMSRSTLIYQLYERIRSDA 376


>ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1|
            predicted protein [Populus trichocarpa]
          Length = 875

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
 Frame = +1

Query: 1    REGGSDAGSASQPSIDVGPKPVSTSERNSKDNPDMERSSGAV--TATPGPARKSLRNQDS 174
            REGG +  S SQP  DV  KP+S S RN  +N + E+ S  V  +A+    RK  RNQ  
Sbjct: 771  REGGMEGASGSQPVKDVNRKPLSPSGRNMMENLEAEKRSHVVPSSASGKSGRKCGRNQAI 830

Query: 175  PQSGKIPRTISVKDVISVLGREIQMSRSTLIYRLYEKVRSES 300
                K+ RTISVKDV+SVL RE QMSRSTLIY+LYE++RS++
Sbjct: 831  VPQTKVVRTISVKDVMSVLEREPQMSRSTLIYQLYERIRSDA 872


>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/99 (53%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
 Frame = +1

Query: 1    REGGSDAGSASQPSIDVGPKPVSTSERNSKDNPDME-RSSGAVTATPGPARKSLRNQDSP 177
            REGG DA S SQP  D   K  STS RN+++N + E R    V ++PG  RK  RN    
Sbjct: 779  REGGIDAASGSQPGKDASRKLSSTSGRNARENQEAEKRGYSTVVSSPGGVRKFGRNNAIV 838

Query: 178  QSGKIPRTISVKDVISVLGREIQMSRSTLIYRLYEKVRS 294
               ++ R I+VKDVISVL RE QM +STLIYRLYEK+RS
Sbjct: 839  PQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEKMRS 877


>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
          Length = 906

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/99 (53%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
 Frame = +1

Query: 1    REGGSDAGSASQPSIDVGPKPVSTSERNSKDNPDME-RSSGAVTATPGPARKSLRNQDSP 177
            REGG DA S SQP  D   K  STS RN+++N + E R    V ++PG  RK  RN    
Sbjct: 803  REGGIDAASGSQPGKDASRKLSSTSGRNARENQEAEKRGYSTVVSSPGGVRKFGRNNAIV 862

Query: 178  QSGKIPRTISVKDVISVLGREIQMSRSTLIYRLYEKVRS 294
               ++ R I+VKDVISVL RE QM +STLIYRLYEK+RS
Sbjct: 863  PQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEKMRS 901


>gb|ADD09583.1| transcription initiation factor [Trifolium repens]
          Length = 934

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/100 (45%), Positives = 64/100 (64%)
 Frame = +1

Query: 1    REGGSDAGSASQPSIDVGPKPVSTSERNSKDNPDMERSSGAVTATPGPARKSLRNQDSPQ 180
            REGG+D  S SQP+ DV  K   +S RN++DN + ER           ARK  +NQ    
Sbjct: 832  REGGTDTASGSQPTKDVSRKSSPSSGRNTRDNQERERKGPTSLGNSAAARKFGKNQSPGS 891

Query: 181  SGKIPRTISVKDVISVLGREIQMSRSTLIYRLYEKVRSES 300
              +I R ISVKDVI+VL RE QMS+S+L+YR+++++ S++
Sbjct: 892  QTRIARNISVKDVIAVLEREPQMSKSSLLYRMHDRIHSDT 931


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