BLASTX nr result

ID: Atractylodes21_contig00024634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024634
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523390.1| nuclear pore complex protein nup153, putativ...   115   3e-24
ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245...   111   7e-23
emb|CBI16571.3| unnamed protein product [Vitis vinifera]              111   7e-23
ref|XP_003526034.1| PREDICTED: uncharacterized protein LOC100806...   100   1e-19
ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arab...   100   1e-19

>ref|XP_002523390.1| nuclear pore complex protein nup153, putative [Ricinus communis]
           gi|223537340|gb|EEF38969.1| nuclear pore complex protein
           nup153, putative [Ricinus communis]
          Length = 1824

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/85 (64%), Positives = 68/85 (80%)
 Frame = +3

Query: 3   VDAVSWSMNGKFLAVAKHDYVSILSSKFEEKLRIMLSFNSLVEDSDANCVVKVDSIRWVR 182
           VDAV WS+ G +LAVAK   + ILSS F+E+LR+ L F S + DSD +C VKVDSIRWVR
Sbjct: 201 VDAVEWSLKGTYLAVAKAHILHILSSNFKERLRLSLPFKSWIADSDDSCSVKVDSIRWVR 260

Query: 183 PDSIMLGCYHLSADGKEENYLVQLI 257
           PDSI++GC+  +ADGKEENYLVQ+I
Sbjct: 261 PDSIVVGCFQQTADGKEENYLVQVI 285


>ref|XP_002283769.2| PREDICTED: uncharacterized protein LOC100245011 [Vitis vinifera]
          Length = 1696

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/85 (60%), Positives = 69/85 (81%)
 Frame = +3

Query: 3   VDAVSWSMNGKFLAVAKHDYVSILSSKFEEKLRIMLSFNSLVEDSDANCVVKVDSIRWVR 182
           VDAV WS+ G  +AVA+ + +S+LSSKF+E+L + LSF S + DS  NC VKVDSIRWVR
Sbjct: 193 VDAVEWSVKGNSIAVARKNTLSLLSSKFKERLCMSLSFKSWIGDSGVNCTVKVDSIRWVR 252

Query: 183 PDSIMLGCYHLSADGKEENYLVQLI 257
           PD I+LGC+ L+ADGKEE+++VQ++
Sbjct: 253 PDCIILGCFKLTADGKEESFMVQVV 277


>emb|CBI16571.3| unnamed protein product [Vitis vinifera]
          Length = 1685

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/85 (60%), Positives = 69/85 (81%)
 Frame = +3

Query: 3   VDAVSWSMNGKFLAVAKHDYVSILSSKFEEKLRIMLSFNSLVEDSDANCVVKVDSIRWVR 182
           VDAV WS+ G  +AVA+ + +S+LSSKF+E+L + LSF S + DS  NC VKVDSIRWVR
Sbjct: 193 VDAVEWSVKGNSIAVARKNTLSLLSSKFKERLCMSLSFKSWIGDSGVNCTVKVDSIRWVR 252

Query: 183 PDSIMLGCYHLSADGKEENYLVQLI 257
           PD I+LGC+ L+ADGKEE+++VQ++
Sbjct: 253 PDCIILGCFKLTADGKEESFMVQVV 277


>ref|XP_003526034.1| PREDICTED: uncharacterized protein LOC100806517 [Glycine max]
          Length = 1744

 Score =  100 bits (250), Expect = 1e-19
 Identities = 48/85 (56%), Positives = 64/85 (75%)
 Frame = +3

Query: 3   VDAVSWSMNGKFLAVAKHDYVSILSSKFEEKLRIMLSFNSLVEDSDANCVVKVDSIRWVR 182
           VDAV W + G F+AVA    +SILS+KFEE++ I LSF S + D  A+  +KVDS++ VR
Sbjct: 189 VDAVDWGLKGSFVAVASKSVLSILSTKFEERVSISLSFRSWIGDFAADGSIKVDSVKCVR 248

Query: 183 PDSIMLGCYHLSADGKEENYLVQLI 257
           PDSI++GC  L+ DGKEENYL+Q+I
Sbjct: 249 PDSIVIGCVQLTEDGKEENYLIQVI 273


>ref|XP_002894510.1| hypothetical protein ARALYDRAFT_337635 [Arabidopsis lyrata subsp.
           lyrata] gi|297340352|gb|EFH70769.1| hypothetical protein
           ARALYDRAFT_337635 [Arabidopsis lyrata subsp. lyrata]
          Length = 1825

 Score =  100 bits (250), Expect = 1e-19
 Identities = 51/85 (60%), Positives = 64/85 (75%)
 Frame = +3

Query: 3   VDAVSWSMNGKFLAVAKHDYVSILSSKFEEKLRIMLSFNSLVEDSDANCVVKVDSIRWVR 182
           VDAV WS  G ++AVA+ + + ILSSKF EK  I LSF+  + DSD +C VKVDSIRWVR
Sbjct: 187 VDAVEWSSKGSYIAVAQDNSLRILSSKFNEKRCIALSFDDWIGDSDEDCSVKVDSIRWVR 246

Query: 183 PDSIMLGCYHLSADGKEENYLVQLI 257
            + I+LGC+ L  DG+EENYLVQ+I
Sbjct: 247 NNCILLGCFQL-IDGREENYLVQVI 270


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