BLASTX nr result

ID: Atractylodes21_contig00024627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024627
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513659.1| conserved hypothetical protein [Ricinus comm...   123   9e-39
ref|XP_002272950.2| PREDICTED: probable RNA-binding protein 18-l...   112   2e-36
emb|CBI22666.3| unnamed protein product [Vitis vinifera]              111   4e-36
emb|CAN68282.1| hypothetical protein VITISV_021345 [Vitis vinifera]   109   1e-35
ref|XP_004145899.1| PREDICTED: probable RNA-binding protein 18-l...   116   7e-35

>ref|XP_002513659.1| conserved hypothetical protein [Ricinus communis]
           gi|223547567|gb|EEF49062.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 170

 Score =  123 bits (308), Expect(2) = 9e-39
 Identities = 57/68 (83%), Positives = 64/68 (94%)
 Frame = -2

Query: 702 KDNNIIFDEKSESRLYVGNLDMRITEAALIKMFSPFGKIVFEDFLWHTRGPKRGEPRGYA 523
           +D+N   DEK+ES+LYVGNLD+RITEAALIKMFSP+GKIV EDFLWHTRGPKRGEPRG+A
Sbjct: 2   QDSNGFIDEKAESKLYVGNLDLRITEAALIKMFSPYGKIVSEDFLWHTRGPKRGEPRGFA 61

Query: 522 FVQFSTKE 499
           FVQFSTKE
Sbjct: 62  FVQFSTKE 69



 Score = 63.5 bits (153), Expect(2) = 9e-39
 Identities = 39/85 (45%), Positives = 45/85 (52%)
 Frame = -1

Query: 427 EAKLAKEKMHGKLACGRPLVVRLAREKYLMEMANXXXXXXXXXXXXXXXXGNGCGQMNRS 248
           EA+LAKEKMHG+LACGRPLVVRLA EKYL E A                 G   GQM+R+
Sbjct: 70  EAELAKEKMHGRLACGRPLVVRLASEKYLEEAAQNSCRAVGEMKKTSTAGGTS-GQMSRN 128

Query: 247 XXXXXXXXXXXAMEEEDHDTKRPKQ 173
                       +EEE    K+ KQ
Sbjct: 129 AKIAAIKNKLRTLEEEGSSVKKQKQ 153


>ref|XP_002272950.2| PREDICTED: probable RNA-binding protein 18-like [Vitis vinifera]
          Length = 218

 Score =  112 bits (280), Expect(2) = 2e-36
 Identities = 50/68 (73%), Positives = 60/68 (88%)
 Frame = -2

Query: 702 KDNNIIFDEKSESRLYVGNLDMRITEAALIKMFSPFGKIVFEDFLWHTRGPKRGEPRGYA 523
           +D N + D+K E RL++GNLD R++E ALIKMFSPFGKIV EDF+WHTRGPKRGEPRG+A
Sbjct: 49  RDPNSLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRGPKRGEPRGFA 108

Query: 522 FVQFSTKE 499
           FV+FSTKE
Sbjct: 109 FVEFSTKE 116



 Score = 66.2 bits (160), Expect(2) = 2e-36
 Identities = 41/91 (45%), Positives = 46/91 (50%)
 Frame = -1

Query: 427 EAKLAKEKMHGKLACGRPLVVRLAREKYLMEMANXXXXXXXXXXXXXXXXGNGCGQMNRS 248
           EA+LAKEKMHGKL CGRPL VRLA EK LME A                  +  GQM+RS
Sbjct: 117 EAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSS-GQMSRS 175

Query: 247 XXXXXXXXXXXAMEEEDHDTKRPKQK*RSEC 155
                       MEEE + TKR K   +  C
Sbjct: 176 AKIAAIKNKLKEMEEESNGTKRQKVADKVSC 206


>emb|CBI22666.3| unnamed protein product [Vitis vinifera]
          Length = 188

 Score =  111 bits (278), Expect(2) = 4e-36
 Identities = 50/67 (74%), Positives = 59/67 (88%)
 Frame = -2

Query: 699 DNNIIFDEKSESRLYVGNLDMRITEAALIKMFSPFGKIVFEDFLWHTRGPKRGEPRGYAF 520
           D N + D+K E RL++GNLD R++E ALIKMFSPFGKIV EDF+WHTRGPKRGEPRG+AF
Sbjct: 20  DPNSLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRGPKRGEPRGFAF 79

Query: 519 VQFSTKE 499
           V+FSTKE
Sbjct: 80  VEFSTKE 86



 Score = 66.2 bits (160), Expect(2) = 4e-36
 Identities = 41/91 (45%), Positives = 46/91 (50%)
 Frame = -1

Query: 427 EAKLAKEKMHGKLACGRPLVVRLAREKYLMEMANXXXXXXXXXXXXXXXXGNGCGQMNRS 248
           EA+LAKEKMHGKL CGRPL VRLA EK LME A                  +  GQM+RS
Sbjct: 87  EAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSS-GQMSRS 145

Query: 247 XXXXXXXXXXXAMEEEDHDTKRPKQK*RSEC 155
                       MEEE + TKR K   +  C
Sbjct: 146 AKIAAIKNKLKEMEEESNGTKRQKVADKVSC 176


>emb|CAN68282.1| hypothetical protein VITISV_021345 [Vitis vinifera]
          Length = 216

 Score =  109 bits (273), Expect(2) = 1e-35
 Identities = 49/68 (72%), Positives = 59/68 (86%)
 Frame = -2

Query: 702 KDNNIIFDEKSESRLYVGNLDMRITEAALIKMFSPFGKIVFEDFLWHTRGPKRGEPRGYA 523
           +D   + D+K E RL++GNLD R++E ALIKMFSPFGKIV EDF+WHTRGPKRGEPRG+A
Sbjct: 43  QDPXXLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRGPKRGEPRGFA 102

Query: 522 FVQFSTKE 499
           FV+FSTKE
Sbjct: 103 FVEFSTKE 110



 Score = 66.2 bits (160), Expect(2) = 1e-35
 Identities = 41/91 (45%), Positives = 46/91 (50%)
 Frame = -1

Query: 427 EAKLAKEKMHGKLACGRPLVVRLAREKYLMEMANXXXXXXXXXXXXXXXXGNGCGQMNRS 248
           EA+LAKEKMHGKL CGRPL VRLA EK LME A                  +  GQM+RS
Sbjct: 115 EAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSS-GQMSRS 173

Query: 247 XXXXXXXXXXXAMEEEDHDTKRPKQK*RSEC 155
                       MEEE + TKR K   +  C
Sbjct: 174 AKIAAIKNKLKEMEEESNGTKRQKVADKVSC 204


>ref|XP_004145899.1| PREDICTED: probable RNA-binding protein 18-like [Cucumis sativus]
           gi|449497265|ref|XP_004160356.1| PREDICTED: probable
           RNA-binding protein 18-like [Cucumis sativus]
          Length = 171

 Score =  116 bits (291), Expect(2) = 7e-35
 Identities = 51/67 (76%), Positives = 62/67 (92%)
 Frame = -2

Query: 699 DNNIIFDEKSESRLYVGNLDMRITEAALIKMFSPFGKIVFEDFLWHTRGPKRGEPRGYAF 520
           D+N   DEK ES+LY+GNLD+RITEAALIK+FSPFGKI+ EDFLWHTRGPKRGEPRG+AF
Sbjct: 2   DSNGFVDEKCESKLYIGNLDLRITEAALIKLFSPFGKIISEDFLWHTRGPKRGEPRGFAF 61

Query: 519 VQFSTKE 499
           +++S+KE
Sbjct: 62  IEYSSKE 68



 Score = 57.0 bits (136), Expect(2) = 7e-35
 Identities = 40/87 (45%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
 Frame = -1

Query: 427 EAKLAKEKMHGKLACGRPLVVRLAREKYLMEMANXXXXXXXXXXXXXXXXGNGCGQMNRS 248
           EAKLAKEKMHGKLACGRPLVVRLA EK LM                    G+  GQ+ RS
Sbjct: 69  EAKLAKEKMHGKLACGRPLVVRLASEK-LMTNTTNDTSRTASESRKSRLGGSSYGQLTRS 127

Query: 247 XXXXXXXXXXXAME--EEDHDTKRPKQ 173
                      A+E   E    K+PKQ
Sbjct: 128 DKIAAIKNKLRALEGGGESSSVKKPKQ 154


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