BLASTX nr result

ID: Atractylodes21_contig00024620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00024620
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP44394.1| nematode resistance-like protein [Solanum tuberosum]    76   3e-12
gb|AAP44393.1| nematode resistance-like protein [Solanum tuberosum]    75   6e-12
gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]         74   9e-12
gb|AAP44392.1| nematode resistance-like protein [Solanum tuberosum]    74   9e-12
ref|XP_003626930.1| TMV resistance protein N [Medicago truncatul...    74   1e-11

>gb|AAP44394.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 980

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
 Frame = +3

Query: 3   WQHEEIHDVIEKNMELKAIEGIVDRFNDHYDENGGFSADVFKSMKNLRLLDIVNDFTSCK 182
           W+ E+I  V+E+N+    IEGI     +  + N  F    F  M +LR L   N +    
Sbjct: 352 WKREDICPVLERNLATDKIEGISLHLTNEEEVN--FGGKAFMQMTSLRFLKFRNAYVCQG 409

Query: 183 PTFLPDELRWLCWHRYPFSSLPVA-NMRKLVGLEISNGNIKHLWKGQKIL 329
           P FLPDELRWL WH YP  SLP +    +LV L +    I  LWK  K L
Sbjct: 410 PEFLPDELRWLDWHGYPSKSLPNSFKGDQLVSLTLKKSRIIQLWKTSKDL 459


>gb|AAP44393.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
 Frame = +3

Query: 3   WQHEEIHDVIEKNMELKAIEGIVDRFNDHYDENGGFSADVFKSMKNLRLLDIVNDFTSCK 182
           W+ E+I  V+E+N+    IEG+     +  + N  F    F  M  LR L   N +    
Sbjct: 518 WKREDICPVLERNLGTDKIEGMSLHLTNEEEVN--FGGKAFMQMTRLRFLKFQNAYVCQG 575

Query: 183 PTFLPDELRWLCWHRYPFSSLPVA-NMRKLVGLEISNGNIKHLWKGQKIL 329
           P FLPDELRWL WH YP  SLP +    +LV L++    I  LWK  K L
Sbjct: 576 PEFLPDELRWLDWHGYPSKSLPNSFKGDQLVSLKLKKSRIIQLWKTSKDL 625


>gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]
          Length = 1136

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
 Frame = +3

Query: 3   WQHEEIHDVIEKNMELKAIEGIVDRFNDHYDENGGFSADVFKSMKNLRLLDIVNDFTSCK 182
           W+ E+I  V+E+N+     EG+     +  + N  F    F  M  LR L   N +    
Sbjct: 518 WKREDICPVLERNLGTDKNEGMSLHLTNEEEVN--FGGKAFMQMTRLRFLKFRNAYVCQG 575

Query: 183 PTFLPDELRWLCWHRYPFSSLPVA-NMRKLVGLEISNGNIKHLWKGQKIL 329
           P FLPDELRWL WH YP  SLP +    +LVGL++    I  LWK  K L
Sbjct: 576 PEFLPDELRWLDWHGYPSKSLPNSFKGDQLVGLKLKKSRIIQLWKTSKDL 625


>gb|AAP44392.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
 Frame = +3

Query: 3   WQHEEIHDVIEKNMELKAIEGIVDRFNDHYDENGGFSADVFKSMKNLRLLDIVNDFTSCK 182
           W+ E+I  V+E+N+     EG+     +  + N  F    F  M  LR L   N +    
Sbjct: 518 WKREDICPVLERNLGTDKNEGMSLHLTNEEEVN--FGGKAFMQMTRLRFLKFRNAYVCQG 575

Query: 183 PTFLPDELRWLCWHRYPFSSLPVA-NMRKLVGLEISNGNIKHLWKGQKIL 329
           P FLPDELRWL WH YP  SLP +    +LVGL++    I  LWK  K L
Sbjct: 576 PEFLPDELRWLDWHGYPSKSLPNSFKGDQLVGLKLKKSRIIQLWKTSKDL 625


>ref|XP_003626930.1| TMV resistance protein N [Medicago truncatula]
           gi|355520952|gb|AET01406.1| TMV resistance protein N
           [Medicago truncatula]
          Length = 1091

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
 Frame = +3

Query: 3   WQHEEIHDVIEKNMELKAIEGIVDRFNDHYDENGGFSADVFKSMKNLRLL-----DIVND 167
           W HE++HDV+ KN   + +E ++  FN      G FS + F+ MK LRLL     D+  D
Sbjct: 522 WFHEDVHDVLAKNTGTETVEALI--FNLQRTGRGSFSTNTFQDMKKLRLLQLDRVDLTGD 579

Query: 168 FTSCKPTFLPDELRWLCWHRYPFSSLP-VANMRKLVGLEISNGNIKHLWKGQKIL 329
           F      +L  +LRW+ W R  F+ +P   +   LV  E+   N+K +WK  K+L
Sbjct: 580 F-----GYLSKQLRWVNWQRSTFNFVPNDFDQENLVAFELKYSNVKQVWKETKLL 629


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